ENCFF964DUY

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 15039.00 83.05 16.79 100.0 SNORD24-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 249.00 80.84 0.28 100.0 Y_RNA.389-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 154.00 0.11 0.17 100.0 SNORD101-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 378.00 0.26 0.42 100.0 SNORD101-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 4349.00 3.02 4.86 84.51 SNORD101-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 133407.00 92.68 148.98 99.0 SNORD101-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 159588.00 97.90 178.21 100.0 SNORD37-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 386210.00 93.29 431.28 98.83 SNORD59A-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 2850.00 74.18 3.18 100.0 SNORA7B-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 4222.00 88.01 4.71 100.0 SNORD14D-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 62.00 17.71 0.07 100.0 Y_RNA.555-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 7299.00 89.12 8.15 91.17 MIR25-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 42339.00 94.00 47.28 97.15 MIR99B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 2006.00 41.39 2.24 78.51 MIR23B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 2483.00 51.23 2.77 83.43 MIR23B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 1109.00 81.01 1.24 100.0 MIR203A-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 3385.00 12.08 3.78 100.0 MIR199B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 20741.00 74.04 23.16 86.95 MIR199B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 1375.00 95.42 1.54 100.0 MIR30B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 794.00 91.06 0.89 100.0 MIR181D-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384857.1 ENST00000384857.1_61_83_+ 61–83 131.00 74.86 0.15 100.0 MIR508-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 81469.00 93.61 90.98 100.0 MIR215-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 1946.00 0.69 2.17 100.0 MIR181A2-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 129276.00 99.18 144.36 99.63 MIR191-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 167.00 74.55 0.19 81.07 MIR149-201 miRNA hepatocyte (In vitro differentiated cells)