ENCFF964DUY

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 4951.00 54.39 5.53 100.0 SNORD115-15-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 96.00 55.49 0.11 100.0 SNORD113-3-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 54181.00 92.76 60.50 100.0 SNORD52-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 11464.00 57.82 12.80 79.94 SNORD117-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 2876.00 14.51 3.21 26.35 SNORD117-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 1998.00 90.69 2.23 97.7 SNORD114-3-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 39.00 1.77 0.04 100.0 SNORD114-3-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 47.00 2.13 0.05 100.0 SNORD114-3-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 30.00 8.67 0.03 100.0 RNA5SP298-201 rRNA pseudogene hepatocyte (In vitro differentiated cells)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 3239.00 70.55 3.62 100.0 SNORD115-38-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 6182.00 58.62 6.90 100.0 SNORD115-10-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 315.00 87.50 0.35 100.0 SNORD113-9-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 733.00 42.52 0.82 100.0 SNORD115-20-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 515.00 1.50 0.58 100.0 SNORD38A-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 29692.00 86.35 33.16 100.0 SNORD38A-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 2801.00 8.15 3.13 100.0 SNORD38A-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 1090.00 90.68 1.22 97.15 SNORD114-20-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 2478.00 7.94 2.77 74.46 7SK.1-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 385.00 1.23 0.43 100.0 7SK.1-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 381.00 1.22 0.43 100.0 7SK.1-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 1036.00 3.32 1.16 100.0 7SK.1-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 278.00 0.89 0.31 59.53 7SK.1-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 5051.00 16.19 5.64 100.0 7SK.1-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 4382.00 14.04 4.89 100.0 7SK.1-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 3202.00 10.26 3.58 79.02 7SK.1-201 misc RNA hepatocyte (In vitro differentiated cells)