ENCFF964DUY

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 3438.00 57.54 3.84 100.0 SNORD115-32-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 1786.00 68.88 1.99 100.0 SNORD115-30-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 61.00 1.33 0.07 100.0 RNY1-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 198.00 4.31 0.22 100.0 RNY1-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 75.00 1.63 0.08 100.0 RNY1-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 909.41 19.77 1.02 59.95 RNY1-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 500.39 10.88 0.56 41.49 RNY1-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 3143.00 49.00 3.51 100.0 SNORD115-42-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 4602.00 2.35 5.14 100.0 RNA5SP202-201 rRNA pseudogene hepatocyte (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 7473.16 3.81 8.35 48.99 RNA5SP202-201 rRNA pseudogene hepatocyte (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 4408.47 2.25 4.92 64.55 RNA5SP202-201 rRNA pseudogene hepatocyte (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 206.00 0.11 0.23 100.0 RNA5SP202-201 rRNA pseudogene hepatocyte (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 4943.52 2.52 5.52 63.65 RNA5SP202-201 rRNA pseudogene hepatocyte (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 815.00 0.42 0.91 100.0 RNA5SP202-201 rRNA pseudogene hepatocyte (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 323.00 0.16 0.36 100.0 RNA5SP202-201 rRNA pseudogene hepatocyte (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 384.00 0.20 0.43 100.0 RNA5SP202-201 rRNA pseudogene hepatocyte (In vitro differentiated cells)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 1231.00 0.63 1.37 100.0 RNA5SP202-201 rRNA pseudogene hepatocyte (In vitro differentiated cells)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 379.00 30.81 0.42 100.0 SNORD114-9-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 693.00 56.34 0.77 100.0 SNORD114-9-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 1196.00 22.69 1.34 100.0 Y_RNA.234-201 misc RNA hepatocyte (In vitro differentiated cells)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 101.00 0.06 0.11 100.0 RNA5S9-201 rRNA hepatocyte (In vitro differentiated cells)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 4288.00 78.93 4.79 100.0 SNORD115-23-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 116.00 4.02 0.13 100.0 RNA5SP141-201 rRNA pseudogene hepatocyte (In vitro differentiated cells)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 18.00 23.68 0.02 100.0 SNORD114-15-201 snoRNA hepatocyte (In vitro differentiated cells)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 385.00 32.38 0.43 100.0 ENST00000364722 snoRNA hepatocyte (In vitro differentiated cells)