ENCFF964DUY

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 9.00 0.06 0.01 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 187.00 1.32 0.21 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 11316.00 80.06 12.64 93.31 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 548.00 3.88 0.61 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 1235.00 12.58 1.38 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 5552.00 60.37 6.20 82.87 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 253.00 3.11 0.28 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 667.00 33.93 0.74 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 121.00 6.15 0.14 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 23.00 1.17 0.03 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 111.00 5.65 0.12 81.02 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 425.00 0.19 0.47 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 81.00 22.38 0.09 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 304.00 23.12 0.34 56.4 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 60.00 4.56 0.07 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 235.00 17.87 0.26 43.6 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 1608.00 30.40 1.80 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 34.00 0.64 0.04 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 86.00 28.86 0.10 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 345.00 61.72 0.39 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 126.00 19.41 0.14 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 649.00 1.58 0.72 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 29.00 0.07 0.03 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 163.00 0.40 0.18 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 1488.00 3.62 1.66 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA hepatocyte (In vitro differentiated cells)