ENCFF964DUY

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 25293.00 12.59 28.24 96.18 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 1169.00 68.48 1.31 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 17.00 1.00 0.02 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 542.00 27.30 0.61 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 282.00 2.87 0.31 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 758.00 0.38 0.85 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 2679.00 1.33 2.99 55.34 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 656.00 27.81 0.73 86.2 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 185.00 7.84 0.21 22.0 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 530.00 3.93 0.59 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 50981.00 53.64 56.93 92.91 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 3978.00 4.19 4.44 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 830.00 22.22 0.93 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 32.00 6.99 0.04 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 408.00 0.99 0.46 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 76.00 0.74 0.08 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 185.00 1.79 0.21 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 31.00 0.30 0.03 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 276.00 2.67 0.31 55.76 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 285.00 2.76 0.32 70.37 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 64.00 0.62 0.07 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 3019.00 22.66 3.37 57.91 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 3827.00 28.72 4.27 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 1801.00 16.63 2.01 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 19.00 0.13 0.02 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA hepatocyte (In vitro differentiated cells)