ENCFF964DUY

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 108.00 23.68 0.12 100.0 ENST00000837997 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 3037.00 63.52 3.39 72.71 ENST00000839036 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 49.00 0.54 0.05 100.0 ENST00000849527 lncRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 7062.00 51.63 7.89 90.43 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 2550.00 18.64 2.85 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 874.00 0.33 0.98 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 392.00 33.97 0.44 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 406.00 35.18 0.45 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 422.00 35.40 0.47 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 392.00 15.31 0.44 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 358.00 32.72 0.40 76.17 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 373.00 0.14 0.42 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 1.00 10.00 0.00 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 6729.00 14.40 7.51 86.78 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 79.00 0.17 0.09 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 17679.00 37.83 19.74 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 1407.00 37.02 1.57 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 719.00 0.75 0.80 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 8925.00 9.36 9.97 84.56 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 67.00 0.07 0.07 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 1773.00 1.86 1.98 85.45 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 12774.00 13.40 14.26 50.82 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 11.00 0.01 0.01 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 99.00 0.10 0.11 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA hepatocyte (In vitro differentiated cells)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 25.00 21.93 0.03 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA hepatocyte (In vitro differentiated cells)