ENCFF964DUY

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 583.36 2.91 0.65 46.74 ENST00000823279 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 145.00 0.72 0.16 100.0 ENST00000823279 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 950.91 4.74 1.06 56.74 ENST00000823279 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 696.00 3.47 0.78 100.0 ENST00000823279 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 5099.00 25.39 5.69 99.45 ENST00000823279 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 1419.63 7.07 1.59 53.17 ENST00000823279 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 1249.35 6.22 1.40 39.66 ENST00000823279 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 604.00 3.01 0.67 80.53 ENST00000823279 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 372.11 1.85 0.42 31.64 ENST00000823279 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 1047.21 5.22 1.17 69.63 ENST00000823801 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 24.00 85.71 0.03 96.0 ENST00000827714 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 1.00 3.57 0.00 4.0 ENST00000827714 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 5604.00 6.11 6.26 100.0 GAS5-377 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 81.00 0.09 0.09 100.0 GAS5-377 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 2470.00 2.69 2.76 100.0 GAS5-377 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 81080.00 88.36 90.54 100.0 GAS5-377 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 438.00 92.21 0.49 100.0 MIR205HG-245 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000833535.1 ENST00000833535.1_763_828_+ 763–828 468.00 32.77 0.52 100.0 TAF12-DT-204 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 673847.00 97.12 752.48 99.74 ZFAS1-238 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 380.00 0.05 0.42 100.0 ZFAS1-238 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 627.00 0.09 0.70 100.0 ZFAS1-238 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 3086.00 0.44 3.45 100.0 ZFAS1-238 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 8701.00 5.38 9.72 100.0 ZFAS1-242 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000836997.1 ENST00000836997.1_305_380_+ 305–380 148216.00 91.65 165.51 100.0 ZFAS1-242 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 188.00 41.23 0.21 100.0 ENST00000837997 lncRNA hepatocyte (In vitro differentiated cells)