ENCFF964DUY

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 572314.00 44.35 639.10 98.93 SNHG12-223 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 18754.00 0.38 20.94 100.0 SNHG25-206 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 3815651.00 77.64 4260.93 78.45 SNHG25-206 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 1017.00 0.02 1.14 100.0 SNHG25-206 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 498.15 0.01 0.56 47.81 SNHG25-206 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 819.75 0.02 0.92 54.8 SNHG25-206 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 747.44 0.02 0.83 34.29 SNHG25-206 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 5922.00 0.12 6.61 75.95 SNHG25-206 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 444.00 0.01 0.50 100.0 SNHG25-206 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000778783.1 ENST00000778783.1_84_171_+ 84–171 455.00 64.08 0.51 100.0 ENST00000778783 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 841.00 86.26 0.94 90.82 MIR155HG-205 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 642.00 23.59 0.72 100.0 ENST00000785178 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 224.00 5.50 0.25 78.32 ENST00000786284 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 1087.00 26.67 1.21 100.0 ENST00000786284 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 62.00 1.52 0.07 31.47 ENST00000786284 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 5174.00 78.11 5.78 93.33 ENST00000788343 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 12366.84 42.07 13.81 52.43 ENST00000797550 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 6345.75 21.59 7.09 26.9 ENST00000797550 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 996.00 3.39 1.11 94.59 ENST00000797550 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 269620.00 86.70 301.08 96.78 MIR181A1HG-212 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 1037.00 0.33 1.16 100.0 MIR181A1HG-212 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 321.00 13.08 0.36 100.0 C19orf48P-218 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 1197.00 48.76 1.34 100.0 C19orf48P-218 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 58826.00 89.63 65.69 95.4 SNHG18-220 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 197.00 24.38 0.22 100.0 ENST00000817026 lncRNA hepatocyte (In vitro differentiated cells)