ENCFF964DUY

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 223.01 0.85 0.25 38.32 ENST00000756336 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 1383.00 5.27 1.54 100.0 ENST00000756336 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 1848.44 7.04 2.06 81.9 ENST00000756336 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 27.00 3.59 0.03 100.0 ENST00000756452 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 417.00 30.48 0.47 100.0 ENST00000760093 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 49.00 3.58 0.05 100.0 ENST00000760093 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 408927.00 92.93 456.65 95.57 SNHG14-356 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 13303.00 33.40 14.86 92.36 LINC02806-241 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 227.00 0.57 0.25 100.0 LINC02806-241 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 26.00 0.07 0.03 100.0 LINC02806-241 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 17778.00 44.63 19.85 83.12 LINC02806-241 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 1200.00 90.57 1.34 100.0 EHBP1-AS1-210 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 865.00 43.08 0.97 100.0 ENST00000770398 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 519.00 25.85 0.58 100.0 ENST00000770398 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 22.00 1.10 0.02 100.0 ENST00000770398 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 65.00 0.35 0.07 100.0 ENST00000771298 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 29.00 0.16 0.03 100.0 ENST00000771298 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 15470.00 84.43 17.28 93.46 ENST00000771298 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 116.00 0.63 0.13 100.0 ENST00000771298 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 4947.00 64.38 5.52 100.0 ENST00000772672 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 7.00 0.09 0.01 100.0 ENST00000772672 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 70.00 0.91 0.08 100.0 ENST00000772672 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 177.00 52.68 0.20 100.0 ENST00000773843 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 223.00 0.02 0.25 100.0 SNHG12-223 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 714152.00 55.34 797.49 94.7 SNHG12-223 lncRNA hepatocyte (In vitro differentiated cells)