ENCFF964DUY

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 4547.00 56.42 5.08 100.0 MIR200CHG-202 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 1654.00 20.52 1.85 100.0 MIR200CHG-202 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 29108.00 80.58 32.50 100.0 SNHG16-266 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 598.00 1.66 0.67 100.0 SNHG16-266 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 417.00 1.15 0.47 100.0 SNHG16-266 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 214.00 0.59 0.24 100.0 SNHG16-266 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 11.00 57.89 0.01 100.0 MEG8-261 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 265.00 35.71 0.30 100.0 NR2F2-AS1-327 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 563.00 3.82 0.63 41.95 ENST00000747675 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 7150.00 48.46 7.98 100.0 ENST00000747675 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 394.00 2.67 0.44 41.17 ENST00000747675 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 385.00 2.61 0.43 40.61 ENST00000747675 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 2442.00 16.55 2.73 100.0 ENST00000747675 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 6216.00 11.79 6.94 96.82 SNHG26-250 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 42387.00 80.37 47.33 97.79 SNHG26-250 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 207.00 18.57 0.23 100.0 LINC02422-207 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 155.00 4.06 0.17 100.0 ENST00000753088 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 124.00 3.25 0.14 100.0 ENST00000753088 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 651.42 2.48 0.73 26.52 ENST00000756336 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 2484.00 9.46 2.77 100.0 ENST00000756336 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 968.00 3.69 1.08 100.0 ENST00000756336 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 448.00 1.71 0.50 100.0 ENST00000756336 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 674.16 2.57 0.75 7.41 ENST00000756336 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 9803.46 37.33 10.95 90.1 ENST00000756336 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 430.50 1.64 0.48 27.56 ENST00000756336 lncRNA hepatocyte (In vitro differentiated cells)