ENCFF964DUY

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000707189.1 ENST00000707189.1_1316_1333_+ 1316–1333 10650.00 79.22 11.89 100.0 ENST00000707189 TEC hepatocyte (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1932_2007_+ 1932–2007 2017.00 1.21 2.25 100.0 MIR17HG-214 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2162_2183_+ 2162–2183 52414.38 31.36 58.53 34.82 MIR17HG-214 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1557_1579_+ 1557–1579 41.00 0.02 0.05 100.0 MIR17HG-214 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1740_1762_+ 1740–1762 106.00 0.06 0.12 100.0 MIR17HG-214 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2162_2185_+ 2162–2185 105455.81 63.09 117.76 66.36 MIR17HG-214 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2046_2067_+ 2046–2067 551.00 0.33 0.62 100.0 MIR17HG-214 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_2069_2124_+ 2069–2124 235.00 0.14 0.26 100.0 MIR17HG-214 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1873_1895_+ 1873–1895 346.00 0.21 0.39 100.0 MIR17HG-214 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000710424.1 ENST00000710424.1_1419_1441_+ 1419–1441 813.00 0.49 0.91 100.0 MIR17HG-214 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_356_384_+ 356–384 8753.00 0.90 9.77 100.0 SNHG32-223 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_387_419_+ 387–419 1969.00 0.20 2.20 100.0 SNHG32-223 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_359_419_+ 359–419 303.00 0.03 0.34 100.0 SNHG32-223 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_352_421_+ 352–421 8984.00 0.92 10.03 60.97 SNHG32-223 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000718227.1 ENST00000718227.1_356_419_+ 356–419 946428.00 96.80 1056.88 100.0 SNHG32-223 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1950_2016_+ 1950–2016 191373.00 96.24 213.71 98.91 SNHG32-227 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1988_2016_+ 1988–2016 1529.00 0.77 1.71 100.0 SNHG32-227 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1955_2016_+ 1955–2016 159.00 0.08 0.18 100.0 SNHG32-227 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000718231.1 ENST00000718231.1_1964_2016_+ 1964–2016 152.00 0.08 0.17 100.0 SNHG32-227 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000718311.1 ENST00000718311.1_841_855_+ 841–855 571.00 65.26 0.64 100.0 B4GALT1-203 nonsense mediated decay hepatocyte (In vitro differentiated cells)
ENST00000722183.1 ENST00000722183.1_57_79_+ 57–79 746.00 18.67 0.83 100.0 ENST00000722183 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 854.00 21.37 0.95 81.57 ENST00000722183 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 243.00 6.08 0.27 100.0 ENST00000722183 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 33.00 35.87 0.04 100.0 MIR34BHG-202 lncRNA hepatocyte (In vitro differentiated cells)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 6218.00 80.11 6.94 85.35 THBS3-AS1-228 lncRNA hepatocyte (In vitro differentiated cells)