ENCFF964DUY

Library Details

Organism: Homo Sapiens
Biosample: hepatocyte (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR673PND
Description: Part of ENCODE experiment ENCSR673PND. The libraries contained in this experiment come from H9-derived embryonic stem cells that were differentiated down a hepatocytic pathway. They are stranded SE101 length reads from rRNA-depleted Total RNA <200 nucleotides in size that was pretreated with Tobacco Acid Pyrophosphatase prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 157.00 81.77 0.18 100.0 MIR15B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 1.00 100.00 0.00 100.0 MIR150-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 306.00 49.35 0.34 100.0 MIR542-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 106.00 2.90 0.12 100.0 MIR500A-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 2910.00 79.66 3.25 100.0 MIR500A-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 2049.00 5.79 2.29 87.98 MIR30A-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 28934.00 81.80 32.31 99.04 MIR30A-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 3344.00 9.45 3.73 100.0 MIR30A-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 398.00 1.13 0.44 100.0 MIR30A-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 133149.00 92.79 148.69 95.41 MIR27B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 927.00 0.65 1.04 100.0 MIR27B-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 400.00 89.69 0.45 100.0 MIR196A2-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 557.00 84.91 0.62 100.0 MIR577-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 71.00 63.39 0.08 75.53 MIR654-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 792.00 92.20 0.88 93.62 MIR204-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 3052.00 91.16 3.41 100.0 MIR152-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 114.00 51.12 0.13 100.0 MIR138-1-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 5594.00 93.80 6.25 100.0 MIR30C1-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 127.00 77.44 0.14 100.0 MIR660-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 2416.00 13.13 2.70 100.0 MIR125B1-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 13509.00 73.44 15.09 91.09 MIR125B1-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 2.00 66.67 0.00 100.0 MIR493-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 1.00 33.33 0.00 100.0 MIR493-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 25218.83 26.98 28.16 31.61 MIR182-201 miRNA hepatocyte (In vitro differentiated cells)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 59786.17 63.97 66.76 69.67 MIR182-201 miRNA hepatocyte (In vitro differentiated cells)