ENCFF908XAD

Library Details

Organism: Homo Sapiens
Biosample: omental fat pad (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR610GDH
Description: Part of ENCODE experiment ENCSR610GDH. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's adipose tissue tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 103.00 74.64 0.24 100.0 MIR378C-201 miRNA omental fat pad (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 1173.00 54.97 2.76 60.59 MIR142HG-201 lncRNA omental fat pad (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 25.00 1.17 0.06 2.28 MIR142HG-201 lncRNA omental fat pad (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 152.97 0.04 0.36 62.18 RPL23A-208 retained intron omental fat pad (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 88.42 0.02 0.21 48.58 RPL23A-208 retained intron omental fat pad (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 324097.00 78.38 763.48 88.71 RPL23A-208 retained intron omental fat pad (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 87236.00 21.10 205.50 91.42 RPL23A-208 retained intron omental fat pad (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 1.00 1.67 0.00 100.0 MIR133A1HG-202 lncRNA omental fat pad (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 2763.00 3.19 6.51 56.24 RPL17-211 retained intron omental fat pad (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 8376.00 9.67 19.73 49.31 RPL17-211 retained intron omental fat pad (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 700.00 0.81 1.65 100.0 RPL17-211 retained intron omental fat pad (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 54742.00 63.20 128.96 96.45 RPL17-211 retained intron omental fat pad (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 16981.00 19.60 40.00 97.46 RPL17-211 retained intron omental fat pad (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 76.00 25.25 0.18 31.54 ENST00000582320 lncRNA omental fat pad (Tissue)
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 12.00 3.99 0.03 100.0 ENST00000582320 lncRNA omental fat pad (Tissue)
ENST00000582320.4 ENST00000582320.4_575_600_+ 575–600 2.00 0.66 0.00 100.0 ENST00000582320 lncRNA omental fat pad (Tissue)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 2350.00 18.85 5.54 100.0 RPL17-214 retained intron omental fat pad (Tissue)
ENST00000582588.1 ENST00000582588.1_258_318_+ 258–318 4301.82 34.51 10.13 52.04 RPL17-214 retained intron omental fat pad (Tissue)
ENST00000582588.1 ENST00000582588.1_258_320_+ 258–320 4883.90 39.18 11.51 52.03 RPL17-214 retained intron omental fat pad (Tissue)
ENST00000583861.1 ENST00000583861.1_1_62_+ 1–62 380682.00 99.11 896.78 99.72 SNORD43-201 snoRNA omental fat pad (Tissue)
ENST00000583861.1 ENST00000583861.1_12_62_+ 12–62 34.00 0.01 0.08 100.0 SNORD43-201 snoRNA omental fat pad (Tissue)
ENST00000584249.1 ENST00000584249.1_60_79_+ 60–79 64.00 36.78 0.15 100.0 MIR151B-201 miRNA omental fat pad (Tissue)
ENST00000584923.1 ENST00000584923.1_153_216_+ 153–216 14.00 0.31 0.03 100.0 SNORD3A-201 snoRNA omental fat pad (Tissue)
ENST00000585078.1 ENST00000585078.1_1_83_+ 1–83 3702.00 78.42 8.72 100.0 SNORD92-201 snoRNA omental fat pad (Tissue)
ENST00000585881.5 ENST00000585881.5_140_162_+ 140–162 3132.00 38.56 7.38 100.0 NSRP1-214 protein coding omental fat pad (Tissue)