ENCFF908XAD

Library Details

Organism: Homo Sapiens
Biosample: omental fat pad (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR610GDH
Description: Part of ENCODE experiment ENCSR610GDH. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's adipose tissue tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000585881.5 ENST00000585881.5_104_126_+ 104–126 3709.00 45.67 8.74 86.08 NSRP1-214 protein coding omental fat pad (Tissue)
ENST00000587762.2 ENST00000587762.2_6337_6420_+ 6337–6420 9386.00 66.15 22.11 100.0 MIR23AHG-201 lncRNA omental fat pad (Tissue)
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 936.00 6.60 2.20 93.69 MIR23AHG-201 lncRNA omental fat pad (Tissue)
ENST00000587762.2 ENST00000587762.2_6462_6481_+ 6462–6481 350.00 2.47 0.82 85.16 MIR23AHG-201 lncRNA omental fat pad (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6638_+ 6619–6638 1028.00 7.25 2.42 94.14 MIR23AHG-201 lncRNA omental fat pad (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6641_+ 6619–6641 361.00 2.54 0.85 68.89 MIR23AHG-201 lncRNA omental fat pad (Tissue)
ENST00000591345.5 ENST00000591345.5_1414_1429_+ 1414–1429 2271.00 72.14 5.35 100.0 ODAD3-204 nonsense mediated decay omental fat pad (Tissue)
ENST00000592790.1 ENST00000592790.1_3381_3401_+ 3381–3401 638.00 6.69 1.50 100.0 VMP1-217 retained intron omental fat pad (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3402_+ 3343–3402 344.00 3.61 0.81 100.0 VMP1-217 retained intron omental fat pad (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3366_+ 3343–3366 5943.00 62.34 14.00 75.59 VMP1-217 retained intron omental fat pad (Tissue)
ENST00000595794.5 ENST00000595794.5_236_279_+ 236–279 288.00 0.05 0.68 100.0 C19orf48P-203 retained intron omental fat pad (Tissue)
ENST00000595794.5 ENST00000595794.5_236_318_+ 236–318 393646.13 63.76 927.32 68.59 C19orf48P-203 retained intron omental fat pad (Tissue)
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 205050.29 33.21 483.04 33.89 C19orf48P-203 retained intron omental fat pad (Tissue)
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 5927.00 0.96 13.96 88.38 C19orf48P-203 retained intron omental fat pad (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 44.00 0.01 0.10 100.0 C19orf48P-203 retained intron omental fat pad (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 3.00 0.00 0.01 100.0 C19orf48P-203 retained intron omental fat pad (Tissue)
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 2.00 100.00 0.00 100.0 ENST00000597420 lncRNA omental fat pad (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 659.00 30.38 1.55 100.0 RPS11-206 retained intron omental fat pad (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 1146.00 52.84 2.70 100.0 RPS11-206 retained intron omental fat pad (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 183167.00 87.18 431.49 88.24 CARMN-209 lncRNA omental fat pad (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 875.00 46.52 2.06 100.0 ENST00000602478 lncRNA omental fat pad (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 160.00 60.61 0.38 100.0 PPFIA1P1-201 processed pseudogene omental fat pad (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 559.00 25.80 1.32 100.0 SNORD114-21-201 snoRNA omental fat pad (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 1273.00 58.74 3.00 100.0 SNORD114-21-201 snoRNA omental fat pad (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 11.00 39.29 0.03 100.0 SNORD115-40-201 snoRNA omental fat pad (Tissue)