ENCFF908XAD

Library Details

Organism: Homo Sapiens
Biosample: omental fat pad (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR610GDH
Description: Part of ENCODE experiment ENCSR610GDH. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's adipose tissue tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 206.00 0.35 0.49 100.0 RPL4-202 retained intron omental fat pad (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 239.00 0.41 0.56 100.0 RPL4-202 retained intron omental fat pad (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 831.00 0.09 1.96 100.0 ENST00000563103 lncRNA omental fat pad (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 4279.00 80.07 10.08 100.0 RPL4-207 retained intron omental fat pad (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 132.00 2.47 0.31 100.0 RPL4-207 retained intron omental fat pad (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 322699.00 95.17 760.19 99.02 ENST00000565336 lncRNA omental fat pad (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 7342.00 2.17 17.30 87.01 ENST00000565336 lncRNA omental fat pad (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 914.00 0.60 2.15 100.0 RBMX-210 retained intron omental fat pad (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 186.00 0.12 0.44 100.0 RBMX-210 retained intron omental fat pad (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 729.00 0.48 1.72 100.0 RBMX-210 retained intron omental fat pad (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 94706.00 61.73 223.10 63.55 RBMX-210 retained intron omental fat pad (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 414.00 16.17 0.98 100.0 RPL4-214 retained intron omental fat pad (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 1302.00 50.86 3.07 100.0 RPL4-214 retained intron omental fat pad (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 5961.84 15.65 14.04 22.45 POLG-DT-202 lncRNA omental fat pad (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 23894.67 62.71 56.29 84.96 POLG-DT-202 lncRNA omental fat pad (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 250.00 0.66 0.59 100.0 POLG-DT-202 lncRNA omental fat pad (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 13203.00 86.02 31.10 100.0 ENST00000570843 lncRNA omental fat pad (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 827.00 76.86 1.95 100.0 MIR497HG-207 lncRNA omental fat pad (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 21931.00 95.73 51.66 97.54 MIR22HG-212 lncRNA omental fat pad (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 431.00 1.20 1.02 73.8 SNORD53B-201 snoRNA omental fat pad (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 33297.00 92.99 78.44 95.55 SNORD53B-201 snoRNA omental fat pad (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 153.00 0.43 0.36 26.2 SNORD53B-201 snoRNA omental fat pad (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 93.00 45.81 0.22 100.0 ENST00000578036 lncRNA omental fat pad (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 655.00 83.55 1.54 100.0 RPL23A-207 protein coding omental fat pad (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 537.00 95.55 1.27 100.0 MIR744-201 miRNA omental fat pad (Tissue)