ENCFF908XAD

Library Details

Organism: Homo Sapiens
Biosample: omental fat pad (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR610GDH
Description: Part of ENCODE experiment ENCSR610GDH. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's adipose tissue tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 614.00 5.08 1.45 72.24 WDR74-204 protein coding omental fat pad (Tissue)
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 111.00 0.92 0.26 100.0 WDR74-204 protein coding omental fat pad (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 137.00 1.13 0.32 100.0 WDR74-204 protein coding omental fat pad (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 473.00 3.91 1.11 100.0 WDR74-204 protein coding omental fat pad (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 223.00 1.84 0.53 33.99 WDR74-204 protein coding omental fat pad (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 110.00 0.91 0.26 100.0 WDR74-204 protein coding omental fat pad (Tissue)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 4566.00 83.12 10.76 100.0 HSPA8-211 retained intron omental fat pad (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 197.00 21.21 0.46 100.0 SCARNA9-201 lncRNA omental fat pad (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 50308.00 94.65 118.51 100.0 TAF1D-215 retained intron omental fat pad (Tissue)
ENST00000530769.5 ENST00000530769.5_2550_2623_+ 2550–2623 1025.00 1.93 2.41 100.0 TAF1D-215 retained intron omental fat pad (Tissue)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 4.00 0.05 0.01 100.0 HSPA8-215 retained intron omental fat pad (Tissue)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 6541.00 83.35 15.41 100.0 HSPA8-215 retained intron omental fat pad (Tissue)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 37.00 0.47 0.09 100.0 HSPA8-215 retained intron omental fat pad (Tissue)
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 156.00 16.40 0.37 100.0 RPS2-215 retained intron omental fat pad (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 345795.00 80.30 814.59 81.24 ENST00000548801 lncRNA omental fat pad (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 1806.00 16.71 4.25 100.0 ENST00000554988 lncRNA omental fat pad (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 3744.00 34.65 8.82 100.0 ENST00000554988 lncRNA omental fat pad (Tissue)
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 1279.00 11.84 3.01 100.0 ENST00000554988 lncRNA omental fat pad (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 8011.00 62.73 18.87 100.0 SNHG14-220 retained intron omental fat pad (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 3894.00 30.49 9.17 100.0 SNHG14-220 retained intron omental fat pad (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 200.00 1.57 0.47 100.0 SNHG14-220 retained intron omental fat pad (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 75.00 0.59 0.18 100.0 SNHG14-220 retained intron omental fat pad (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 598.00 97.71 1.41 100.0 TEKT4P2-201 transcribed unprocessed pseudogene omental fat pad (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 560.00 0.96 1.32 100.0 RPL4-202 retained intron omental fat pad (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 54298.00 92.94 127.91 97.63 RPL4-202 retained intron omental fat pad (Tissue)