ENCFF853XSN

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR091JNF
Description: Part of ENCODE experiment ENCSR091JNF. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 617.00 1.32 1.86 100.0 SNHG25-206 lncRNA Peyer's patch (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 302.97 0.65 0.92 44.55 SNHG25-206 lncRNA Peyer's patch (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 304.62 0.65 0.92 46.37 SNHG25-206 lncRNA Peyer's patch (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 444.02 0.95 1.34 41.38 SNHG25-206 lncRNA Peyer's patch (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 6697.00 14.29 20.23 83.22 SNHG25-206 lncRNA Peyer's patch (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 231.00 0.49 0.70 100.0 SNHG25-206 lncRNA Peyer's patch (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 2654.00 82.47 8.02 86.11 MIR155HG-205 lncRNA Peyer's patch (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 1.00 50.00 0.00 100.0 ENST00000784740 lncRNA Peyer's patch (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 16.00 0.18 0.05 100.0 ENST00000785178 lncRNA Peyer's patch (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 23.00 2.43 0.07 71.88 ENST00000786284 lncRNA Peyer's patch (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 190.00 20.04 0.57 100.0 ENST00000786284 lncRNA Peyer's patch (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 9.00 0.95 0.03 36.0 ENST00000786284 lncRNA Peyer's patch (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 3019.48 12.56 9.12 49.23 ENST00000797550 lncRNA Peyer's patch (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 3271.71 13.61 9.88 53.34 ENST00000797550 lncRNA Peyer's patch (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 9781.00 40.67 29.55 72.37 ENST00000797550 lncRNA Peyer's patch (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 163213.00 85.43 493.10 91.91 MIR181A1HG-212 lncRNA Peyer's patch (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 299.00 0.16 0.90 100.0 MIR181A1HG-212 lncRNA Peyer's patch (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 224.00 66.67 0.68 100.0 C19orf48P-218 lncRNA Peyer's patch (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 20762.00 79.63 62.73 94.36 SNHG18-220 lncRNA Peyer's patch (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 231.00 11.90 0.70 100.0 ENST00000817026 lncRNA Peyer's patch (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 23.00 0.12 0.07 100.0 ENST00000823279 lncRNA Peyer's patch (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 389.15 1.96 1.18 9.75 ENST00000823279 lncRNA Peyer's patch (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 161.71 0.81 0.49 43.01 ENST00000823279 lncRNA Peyer's patch (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 3205.49 16.11 9.68 71.26 ENST00000823279 lncRNA Peyer's patch (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 386.14 1.94 1.17 9.23 ENST00000823279 lncRNA Peyer's patch (Tissue)