ENCFF853XSN

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR091JNF
Description: Part of ENCODE experiment ENCSR091JNF. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 242.59 0.65 0.73 34.81 ENST00000756336 lncRNA Peyer's patch (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 4573.78 12.28 13.82 62.97 ENST00000756336 lncRNA Peyer's patch (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 7.00 0.02 0.02 100.0 ENST00000756336 lncRNA Peyer's patch (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 686.16 1.84 2.07 76.75 ENST00000756336 lncRNA Peyer's patch (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 55.00 34.81 0.17 100.0 ENST00000756452 lncRNA Peyer's patch (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 8417.00 57.92 25.43 100.0 ENST00000760093 lncRNA Peyer's patch (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 2182.00 15.02 6.59 100.0 ENST00000760093 lncRNA Peyer's patch (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 98950.00 36.45 298.95 89.89 LINC02806-241 lncRNA Peyer's patch (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 139.00 0.05 0.42 100.0 LINC02806-241 lncRNA Peyer's patch (Tissue)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 1.00 0.00 0.00 100.0 LINC02806-241 lncRNA Peyer's patch (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 137426.00 50.62 415.19 77.8 LINC02806-241 lncRNA Peyer's patch (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 785.00 93.68 2.37 100.0 EHBP1-AS1-210 lncRNA Peyer's patch (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 188.00 2.33 0.57 100.0 ENST00000770398 lncRNA Peyer's patch (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 220.00 2.72 0.66 100.0 ENST00000770398 lncRNA Peyer's patch (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 6256.00 77.46 18.90 100.0 ENST00000770398 lncRNA Peyer's patch (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 332.00 0.32 1.00 100.0 ENST00000771298 lncRNA Peyer's patch (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 9666.00 9.25 29.20 100.0 ENST00000771298 lncRNA Peyer's patch (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 76777.00 73.47 231.96 89.8 ENST00000771298 lncRNA Peyer's patch (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 1558.00 1.49 4.71 100.0 ENST00000771298 lncRNA Peyer's patch (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 43.00 4.64 0.13 100.0 ENST00000772672 lncRNA Peyer's patch (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 629.00 7.62 1.90 100.0 ENST00000773843 lncRNA Peyer's patch (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 210573.00 28.72 636.19 85.84 SNHG12-223 lncRNA Peyer's patch (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 520166.00 70.95 1571.54 99.07 SNHG12-223 lncRNA Peyer's patch (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 29952.00 63.92 90.49 100.0 SNHG25-206 lncRNA Peyer's patch (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 364.00 0.78 1.10 72.65 SNHG25-206 lncRNA Peyer's patch (Tissue)