ENCFF853XSN

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR091JNF
Description: Part of ENCODE experiment ENCSR091JNF. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 8.00 21.62 0.02 100.0 MIR34BHG-202 lncRNA Peyer's patch (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 4270.00 68.66 12.90 76.76 THBS3-AS1-228 lncRNA Peyer's patch (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 6337.00 40.29 19.15 100.0 MIR200CHG-202 lncRNA Peyer's patch (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 4102.00 26.08 12.39 100.0 MIR200CHG-202 lncRNA Peyer's patch (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 2157.00 35.85 6.52 100.0 SNHG16-266 lncRNA Peyer's patch (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 225.00 3.74 0.68 100.0 SNHG16-266 lncRNA Peyer's patch (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 704.00 11.70 2.13 100.0 SNHG16-266 lncRNA Peyer's patch (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 5.00 55.56 0.02 100.0 MEG8-261 lncRNA Peyer's patch (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 250.00 49.02 0.76 100.0 NR2F2-AS1-327 lncRNA Peyer's patch (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 396.00 3.30 1.20 48.65 ENST00000747675 lncRNA Peyer's patch (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 6606.00 55.05 19.96 100.0 ENST00000747675 lncRNA Peyer's patch (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 233.00 1.94 0.70 37.04 ENST00000747675 lncRNA Peyer's patch (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 185.00 1.54 0.56 31.84 ENST00000747675 lncRNA Peyer's patch (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 698.00 5.82 2.11 100.0 ENST00000747675 lncRNA Peyer's patch (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 21097.00 65.55 63.74 87.39 SNHG26-250 lncRNA Peyer's patch (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 4909.00 15.25 14.83 100.0 SNHG26-250 lncRNA Peyer's patch (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 154.00 15.71 0.47 100.0 LINC02422-207 lncRNA Peyer's patch (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 58.00 2.18 0.18 100.0 ENST00000753088 lncRNA Peyer's patch (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 719.00 27.07 2.17 100.0 ENST00000753088 lncRNA Peyer's patch (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 4442.28 11.92 13.42 47.62 ENST00000756336 lncRNA Peyer's patch (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 723.00 1.94 2.18 100.0 ENST00000756336 lncRNA Peyer's patch (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 313.00 0.84 0.95 100.0 ENST00000756336 lncRNA Peyer's patch (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 81.00 0.22 0.24 100.0 ENST00000756336 lncRNA Peyer's patch (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 13005.39 34.91 39.29 63.27 ENST00000756336 lncRNA Peyer's patch (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 7788.72 20.90 23.53 38.35 ENST00000756336 lncRNA Peyer's patch (Tissue)