ENCFF853XSN

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR091JNF
Description: Part of ENCODE experiment ENCSR091JNF. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 1723.00 0.08 5.21 100.0 GAS5-230 retained intron Peyer's patch (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 470.00 0.02 1.42 100.0 GAS5-230 retained intron Peyer's patch (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 8000.00 0.39 24.17 100.0 GAS5-230 retained intron Peyer's patch (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 1.00 0.00 0.00 100.0 GAS5-230 retained intron Peyer's patch (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 494.00 0.02 1.49 100.0 GAS5-230 retained intron Peyer's patch (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 3838.00 0.18 11.60 100.0 GAS5-230 retained intron Peyer's patch (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 7612.00 0.37 23.00 84.45 GAS5-230 retained intron Peyer's patch (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 8130.00 0.39 24.56 100.0 GAS5-230 retained intron Peyer's patch (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 75.00 0.00 0.23 100.0 GAS5-230 retained intron Peyer's patch (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 163.00 0.01 0.49 100.0 GAS5-230 retained intron Peyer's patch (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 16835.00 0.81 50.86 100.0 GAS5-230 retained intron Peyer's patch (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 216913.00 10.44 655.34 100.0 GAS5-230 retained intron Peyer's patch (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 1.00 0.00 0.00 100.0 GAS5-230 retained intron Peyer's patch (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 215.00 22.28 0.65 100.0 FTX-219 lncRNA Peyer's patch (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 494.00 51.19 1.49 93.92 FTX-219 lncRNA Peyer's patch (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 267.00 1.86 0.81 64.96 CTC1-214 protein coding Peyer's patch (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 542.00 3.77 1.64 91.25 CTC1-214 protein coding Peyer's patch (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 5856.00 40.70 17.69 85.51 CTC1-214 protein coding Peyer's patch (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 144.00 1.00 0.44 35.04 CTC1-214 protein coding Peyer's patch (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 2202.00 15.30 6.65 59.84 CTC1-214 protein coding Peyer's patch (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 282.00 1.96 0.85 100.0 CTC1-214 protein coding Peyer's patch (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 502.00 3.49 1.52 100.0 CTC1-214 protein coding Peyer's patch (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 156.00 1.08 0.47 100.0 CTC1-214 protein coding Peyer's patch (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 106.00 0.64 0.32 53.27 ENST00000651540 lncRNA Peyer's patch (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 1081.00 6.51 3.27 95.41 ENST00000651540 lncRNA Peyer's patch (Tissue)