ENCFF853XSN

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR091JNF
Description: Part of ENCODE experiment ENCSR091JNF. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 126.00 21.32 0.38 100.0 HCN2-201 protein coding Peyer's patch (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 10.00 7.69 0.03 100.0 ATP5MC3-201 protein coding Peyer's patch (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 340.00 83.95 1.03 100.0 CDC25A-201 protein coding Peyer's patch (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 1466.00 76.43 4.43 100.0 RUNX3-201 protein coding Peyer's patch (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 786.00 63.85 2.37 100.0 BLOC1S4-201 protein coding Peyer's patch (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 128.00 12.49 0.39 100.0 ATAD5-201 protein coding Peyer's patch (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 100.00 6.20 0.30 100.0 SLITRK5-201 protein coding Peyer's patch (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 2.00 6.67 0.01 100.0 HASPIN-201 protein coding Peyer's patch (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 1471.00 98.59 4.44 100.0 ATG101-201 protein coding Peyer's patch (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 102.00 60.36 0.31 100.0 PRICKLE1-201 protein coding Peyer's patch (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 221.00 96.09 0.67 99.55 MIR133A2-201 miRNA Peyer's patch (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 27.00 26.21 0.08 100.0 PBLD-204 protein coding Peyer's patch (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 179326.00 85.56 541.78 96.64 MIRLET7BHG-201 lncRNA Peyer's patch (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 17176.00 8.20 51.89 84.84 MIRLET7BHG-201 lncRNA Peyer's patch (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 10757.00 2.75 32.50 64.06 MIR375-201 miRNA Peyer's patch (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 376347.00 96.29 1137.03 99.02 MIR375-201 miRNA Peyer's patch (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 4175.00 45.81 12.61 100.0 MIR30E-201 miRNA Peyer's patch (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 4443.00 48.75 13.42 100.0 MIR30E-201 miRNA Peyer's patch (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 374.00 42.12 1.13 100.0 MIR29A-201 miRNA Peyer's patch (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 119.00 79.87 0.36 100.0 MIR345-201 miRNA Peyer's patch (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 12688.00 98.64 38.33 100.0 MIR16-2-201 miRNA Peyer's patch (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 1011.00 94.66 3.05 100.0 MIR340-201 miRNA Peyer's patch (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 7.00 0.66 0.02 100.0 MIR340-201 miRNA Peyer's patch (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 1256.00 64.48 3.79 100.0 MIR107-201 miRNA Peyer's patch (Tissue)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 227.00 85.02 0.69 89.02 MIR381-201 miRNA Peyer's patch (Tissue)