ENCFF853XSN

Library Details

Organism: Homo Sapiens
Biosample: Peyer's patch (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR091JNF
Description: Part of ENCODE experiment ENCSR091JNF. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's ileum tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 2923.00 49.39 8.83 100.0 ENST00000570843 lncRNA Peyer's patch (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 3465.00 87.06 10.47 100.0 MIR497HG-207 lncRNA Peyer's patch (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 59606.00 97.96 180.08 98.58 MIR22HG-212 lncRNA Peyer's patch (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 331.00 49.04 1.00 65.42 SNORD53B-201 snoRNA Peyer's patch (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 175.00 25.93 0.53 34.58 SNORD53B-201 snoRNA Peyer's patch (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 340.00 80.95 1.03 100.0 ENST00000578036 lncRNA Peyer's patch (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 843.00 87.36 2.55 100.0 RPL23A-207 protein coding Peyer's patch (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 242.00 90.64 0.73 100.0 MIR744-201 miRNA Peyer's patch (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 1177.00 81.23 3.56 100.0 MIR378C-201 miRNA Peyer's patch (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 9055.00 88.36 27.36 93.12 MIR142HG-201 lncRNA Peyer's patch (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 2.00 0.02 0.01 100.0 MIR142HG-201 lncRNA Peyer's patch (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 141.00 1.38 0.43 8.26 MIR142HG-201 lncRNA Peyer's patch (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 1281.97 0.06 3.87 57.54 RPL23A-208 retained intron Peyer's patch (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 937.36 0.04 2.83 50.07 RPL23A-208 retained intron Peyer's patch (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 1777976.00 81.74 5371.66 89.37 RPL23A-208 retained intron Peyer's patch (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 388033.00 17.84 1172.33 92.07 RPL23A-208 retained intron Peyer's patch (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 14.00 5.26 0.04 100.0 MIR133A1HG-202 lncRNA Peyer's patch (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 7988.00 6.82 24.13 57.43 RPL17-211 retained intron Peyer's patch (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 23551.00 20.10 71.15 63.79 RPL17-211 retained intron Peyer's patch (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 399.00 0.34 1.21 100.0 RPL17-211 retained intron Peyer's patch (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 52076.00 44.45 157.33 90.54 RPL17-211 retained intron Peyer's patch (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 28768.00 24.56 86.91 92.26 RPL17-211 retained intron Peyer's patch (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 19.00 30.16 0.06 38.0 ENST00000582320 lncRNA Peyer's patch (Tissue)
ENST00000582320.4 ENST00000582320.4_575_600_+ 575–600 7.00 11.11 0.02 100.0 ENST00000582320 lncRNA Peyer's patch (Tissue)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 5923.00 14.27 17.89 100.0 RPL17-214 retained intron Peyer's patch (Tissue)