ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 49.00 5.00 0.21 100.0 RNA5SP298-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 81.00 35.68 0.34 100.0 SNORD115-38-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 271.00 33.88 1.15 100.0 SNORD115-10-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 1020.00 78.89 4.34 100.0 SNORD113-9-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 1.00 3.12 0.00 100.0 SNORD115-20-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 33912.00 90.46 144.41 100.0 SNORD38A-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 1389.00 3.71 5.91 100.0 SNORD38A-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 885.00 2.36 3.77 100.0 SNORD38A-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 2129.00 88.19 9.07 97.44 SNORD114-20-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 475.00 18.89 2.02 78.0 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 38.00 1.51 0.16 100.0 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 42.00 1.67 0.18 100.0 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 25.00 0.99 0.11 100.0 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 326.00 12.96 1.39 71.33 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 38.00 1.51 0.16 100.0 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 248.00 9.86 1.06 64.92 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 16.00 0.64 0.07 100.0 7SK.1-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 1112.00 67.43 4.74 100.0 SNORD14C-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 80.00 41.88 0.34 100.0 SNORD115-44-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 1224.00 78.46 5.21 100.0 RNA5SP77-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 15535.00 86.90 66.15 100.0 SNORD114-22-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 1966.00 11.00 8.37 96.18 SNORD114-22-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 9980.00 87.94 42.50 100.0 SNORD6-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 411.00 3.62 1.75 100.0 SNORD6-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 151.00 2.97 0.64 100.0 RNY3-201 misc RNA gastroesophageal sphincter (Tissue)