ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 1115.00 1.38 4.75 100.0 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 465.00 0.58 1.98 100.0 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 3990.24 4.94 16.99 41.86 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 2034.00 2.52 8.66 100.0 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 126.00 0.16 0.54 100.0 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 3092.80 3.83 13.17 67.51 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 329.00 0.41 1.40 100.0 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 374.00 0.46 1.59 100.0 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 2891.53 3.58 12.31 56.92 RNA5SP202-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 5614.00 83.27 23.91 100.0 SNORD114-9-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 574.00 8.51 2.44 100.0 SNORD114-9-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 6073.00 19.56 25.86 100.0 Y_RNA.234-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000364451.1 ENST00000364451.1_1_95_+ 1–95 361.00 0.69 1.54 100.0 RNA5S9-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 104.00 68.42 0.44 100.0 SNORD115-23-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 163.00 6.45 0.69 100.0 RNA5SP141-201 rRNA pseudogene gastroesophageal sphincter (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 968.00 83.95 4.12 100.0 SNORD114-15-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 47.00 19.92 0.20 100.0 ENST00000364722 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 213.00 33.13 0.91 100.0 SNORD115-15-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 305.00 66.59 1.30 100.0 SNORD113-3-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 5219.00 84.99 22.22 100.0 SNORD52-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 4053.00 67.96 17.26 89.35 SNORD117-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 483.00 8.10 2.06 17.77 SNORD117-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 27.00 0.53 0.11 100.0 SNORD114-3-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 438.00 8.66 1.87 100.0 SNORD114-3-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 4169.00 82.42 17.75 96.89 SNORD114-3-201 snoRNA gastroesophageal sphincter (Tissue)