ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 280.00 0.71 1.19 100.0 SNORD82-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 11475.00 28.96 48.86 98.77 SNORD82-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 624.00 1.57 2.66 100.0 SNORD82-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 921.00 2.32 3.92 100.0 SNORD82-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 6387.00 16.12 27.20 90.78 SNORD82-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 5510.00 13.90 23.46 33.47 SNORD82-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 10712.73 27.03 45.62 65.08 SNORD82-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 5383.00 94.41 22.92 96.66 MIR146B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 514.00 82.50 2.19 100.0 SNHG20-201 lncRNA gastroesophageal sphincter (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 2.00 0.38 0.01 100.0 ATP5MK-205 protein coding gastroesophageal sphincter (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 174.00 32.77 0.74 100.0 ATP5MK-205 protein coding gastroesophageal sphincter (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 22.00 23.66 0.09 100.0 LINC01556-201 lncRNA gastroesophageal sphincter (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 425.00 58.22 1.81 100.0 ATAD3A-202 protein coding gastroesophageal sphincter (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 10.00 7.14 0.04 62.5 TMC5-202 protein coding gastroesophageal sphincter (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 8.00 36.36 0.03 100.0 ZMYM2-203 protein coding gastroesophageal sphincter (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 30.00 1.26 0.13 100.0 RNVU1-7-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 3227.00 70.26 13.74 100.0 SNORD24-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 409.00 59.88 1.74 100.0 Y_RNA.389-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 120.00 0.09 0.51 100.0 SNORD101-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 1786.00 1.39 7.61 83.07 SNORD101-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 123027.00 95.42 523.88 99.45 SNORD101-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 278.00 0.22 1.18 100.0 SNORD101-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 27816.00 96.89 118.45 100.0 SNORD37-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 942106.00 95.62 4011.74 99.37 SNORD59A-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 117.00 15.33 0.50 100.0 SNORA7B-201 snoRNA gastroesophageal sphincter (Tissue)