ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 184.00 0.04 0.78 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 3095.00 0.67 13.18 95.91 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 81719.00 17.70 347.98 47.22 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 17.00 0.00 0.07 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 40.00 0.01 0.17 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 167.00 55.12 0.71 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 1098.00 0.47 4.68 99.73 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 163.00 16.50 0.69 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 110.00 11.13 0.47 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 73.00 6.67 0.31 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 132.00 1.77 0.56 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 1.00 0.00 0.00 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 47.00 0.02 0.20 6.06 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 457.00 14.13 1.95 30.82 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 1026.00 31.72 4.37 81.36 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 402.00 10.27 1.71 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 1561.00 0.34 6.65 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 325180.00 70.49 1384.70 95.25 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 559.00 36.61 2.38 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 16.00 1.86 0.07 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 84.00 0.26 0.36 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 156.00 1.39 0.66 36.53 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 211.00 1.88 0.90 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 54.00 0.48 0.23 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA gastroesophageal sphincter (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 353.00 3.14 1.50 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA gastroesophageal sphincter (Tissue)