ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 94.00 1.50 0.40 100.0 LIMD1-AS1-204 lncRNA gastroesophageal sphincter (Tissue)
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 50.00 0.80 0.21 100.0 LIMD1-AS1-204 lncRNA gastroesophageal sphincter (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 1270.00 20.26 5.41 84.67 LIMD1-AS1-204 lncRNA gastroesophageal sphincter (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 15935.00 70.03 67.86 79.43 MIR99AHG-262 lncRNA gastroesophageal sphincter (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 1076.00 4.73 4.58 100.0 MIR99AHG-262 lncRNA gastroesophageal sphincter (Tissue)
ENST00000660376.1 ENST00000660376.1_1_78_+ 1–78 4.00 1.17 0.02 100.0 SNHG14-266 lncRNA gastroesophageal sphincter (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 108.00 72.97 0.46 100.0 SNHG14-270 lncRNA gastroesophageal sphincter (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 324.00 0.87 1.38 100.0 SNHG14-275 lncRNA gastroesophageal sphincter (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 56.00 70.00 0.24 98.25 MIR9-2HG-225 lncRNA gastroesophageal sphincter (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 237.00 26.51 1.01 100.0 MEG8-233 lncRNA gastroesophageal sphincter (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 285.00 31.88 1.21 100.0 MEG8-233 lncRNA gastroesophageal sphincter (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 1148.00 42.57 4.89 100.0 SNHG14-278 lncRNA gastroesophageal sphincter (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 188.00 6.97 0.80 95.43 SNHG14-278 lncRNA gastroesophageal sphincter (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 1020.00 48.32 4.34 100.0 MEG8-234 lncRNA gastroesophageal sphincter (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 286.00 13.55 1.22 100.0 MEG8-234 lncRNA gastroesophageal sphincter (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 571.00 87.44 2.43 100.0 SNHG17-252 lncRNA gastroesophageal sphincter (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 920.00 8.82 3.92 57.11 SNHG14-288 lncRNA gastroesophageal sphincter (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 8907.00 85.41 37.93 97.77 SNHG14-288 lncRNA gastroesophageal sphincter (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 10.00 2.91 0.04 100.0 SNHG14-295 lncRNA gastroesophageal sphincter (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 107.00 53.50 0.46 100.0 MEG8-240 lncRNA gastroesophageal sphincter (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 10.00 0.40 0.04 100.0 SNHG14-303 lncRNA gastroesophageal sphincter (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 59.00 8.90 0.25 100.0 SNHG14-306 lncRNA gastroesophageal sphincter (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 6.00 0.90 0.03 100.0 SNHG14-306 lncRNA gastroesophageal sphincter (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 317.00 47.81 1.35 98.75 SNHG14-306 lncRNA gastroesophageal sphincter (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 124.00 9.14 0.53 100.0 ENST00000666735 lncRNA gastroesophageal sphincter (Tissue)