ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 6905.00 50.34 29.40 57.62 SNORD91A-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 22116.00 48.65 94.18 98.19 MIR486-1-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 40165.00 53.95 171.03 60.66 NOP56-219 retained intron gastroesophageal sphincter (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 147.00 0.20 0.63 100.0 NOP56-219 retained intron gastroesophageal sphincter (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 300.00 0.40 1.28 100.0 NOP56-219 retained intron gastroesophageal sphincter (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 3785.00 5.08 16.12 77.66 NOP56-219 retained intron gastroesophageal sphincter (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 1356.00 3.39 5.77 52.05 RNA5-8SN2-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 13001.70 32.47 55.36 44.89 RNA5-8SN2-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 40.00 0.10 0.17 100.0 RNA5-8SN2-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 614.00 1.53 2.61 100.0 RNA5-8SN2-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 13.00 0.03 0.06 100.0 RNA5-8SN2-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 1900.00 4.75 8.09 58.35 RNA5-8SN2-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 16411.37 40.99 69.88 56.67 RNA5-8SN2-201 rRNA gastroesophageal sphincter (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 594.00 5.86 2.53 100.0 U2.3-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 608.91 6.01 2.59 38.98 U2.3-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 19.00 0.19 0.08 100.0 U2.3-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 3.00 0.03 0.01 33.33 U2.3-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 5.00 0.05 0.02 31.25 U2.3-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 5.00 0.05 0.02 100.0 U2.3-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 1018.89 10.06 4.34 65.23 U2.3-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 404.00 3.99 1.72 100.0 U2.3-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 199.00 1.96 0.85 100.0 U2.3-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 172.00 1.70 0.73 100.0 U2.3-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 5.22 0.05 0.02 86.92 U2.3-201 snRNA gastroesophageal sphincter (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 1183.00 16.56 5.04 100.0 U2.6-201 snRNA gastroesophageal sphincter (Tissue)