ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 3689.00 12.93 15.71 74.02 MT-TY-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387409.1 ENST00000387409.1_1_28_+ 1–28 805.00 2.82 3.43 100.0 MT-TY-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387409.1 ENST00000387409.1_1_56_+ 1–56 125.00 0.44 0.53 100.0 MT-TY-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387409.1 ENST00000387409.1_1_32_+ 1–32 6962.00 24.40 29.65 85.48 MT-TY-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387419.1 ENST00000387419.1_1_51_+ 1–51 997.00 73.31 4.25 100.0 MT-TD-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387421.1 ENST00000387421.1_1_31_+ 1–31 290.00 0.42 1.23 100.0 MT-TK-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387421.1 ENST00000387421.1_1_58_+ 1–58 2811.00 4.03 11.97 100.0 MT-TK-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387421.1 ENST00000387421.1_1_28_+ 1–28 91.00 0.13 0.39 100.0 MT-TK-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387421.1 ENST00000387421.1_1_52_+ 1–52 63878.00 91.61 272.01 100.0 MT-TK-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387449.1 ENST00000387449.1_1_53_+ 1–53 86.00 3.87 0.37 100.0 MT-TS2-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387449.1 ENST00000387449.1_1_20_+ 1–20 269.00 12.09 1.15 88.78 MT-TS2-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387449.1 ENST00000387449.1_1_26_+ 1–26 228.00 10.25 0.97 100.0 MT-TS2-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387456.1 ENST00000387456.1_1_31_+ 1–31 186.00 14.27 0.79 100.0 MT-TL2-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387459.1 ENST00000387459.1_24_69_+ 24–69 3.00 0.01 0.01 100.0 MT-TE-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387459.1 ENST00000387459.1_40_67_+ 40–67 109.00 0.24 0.46 79.56 MT-TE-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387459.1 ENST00000387459.1_39_69_+ 39–69 28.00 0.06 0.12 24.14 MT-TE-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387459.1 ENST00000387459.1_1_69_+ 1–69 38112.00 82.54 162.29 91.47 MT-TE-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387459.1 ENST00000387459.1_1_57_+ 1–57 197.00 0.43 0.84 100.0 MT-TE-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387459.1 ENST00000387459.1_13_67_+ 13–67 43.00 0.09 0.18 100.0 MT-TE-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387459.1 ENST00000387459.1_1_62_+ 1–62 169.00 0.37 0.72 90.37 MT-TE-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000388006.1 ENST00000388006.1_7_28_+ 7–28 1.00 100.00 0.00 100.0 MIR196A1-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000389680.2 ENST00000389680.2_2_90_+ 2–90 1696.00 17.16 7.22 100.0 MT-RNR1-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000389680.2 ENST00000389680.2_316_354_+ 316–354 1928.00 19.51 8.21 100.0 MT-RNR1-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000390180.1 ENST00000390180.1_64_86_+ 64–86 182.00 90.10 0.78 100.0 MIR454-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000390204.1 ENST00000390204.1_51_72_+ 51–72 597.00 81.89 2.54 100.0 MIR501-201 miRNA gastroesophageal sphincter (Tissue)