ENCFF811DGS

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR269YSX
Description: Part of ENCODE experiment ENCSR269YSX. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000386747.1 ENST00000386747.1_4_93_+ 4–93 13792.00 55.01 58.73 97.57 SNORD83A-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 8642.00 34.47 36.80 96.3 SNORD83A-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 4308.00 88.30 18.34 100.0 SNORD41-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 440.00 11.40 1.87 53.01 MT-TF-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 689.00 17.85 2.93 100.0 MT-TF-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 365.00 9.46 1.55 63.48 MT-TF-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 2695.00 53.89 11.48 100.0 MT-TV-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 2776.00 12.50 11.82 74.4 MT-RNR2-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 1503.00 6.77 6.40 100.0 MT-RNR2-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 9.00 0.04 0.04 100.0 MT-RNR2-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 45.00 0.20 0.19 100.0 MT-RNR2-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 7152.00 32.21 30.46 91.86 MT-RNR2-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 44.00 0.20 0.19 100.0 MT-RNR2-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 4.00 0.02 0.02 100.0 MT-RNR2-201 Mt rRNA gastroesophageal sphincter (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 125.00 4.81 0.53 100.0 MT-TI-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 1708.00 65.67 7.27 96.44 MT-TI-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 29014.00 56.05 123.55 86.89 MT-TQ-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 9156.62 17.69 38.99 59.82 MT-TQ-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 15.00 0.03 0.06 100.0 MT-TQ-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 4660.83 9.00 19.85 58.21 MT-TQ-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 8192.00 45.74 34.88 100.0 MT-TM-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 6156.00 34.37 26.21 72.57 MT-TM-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 180.00 29.32 0.77 100.0 MT-TC-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387409.1 ENST00000387409.1_1_50_+ 1–50 370.00 1.30 1.58 100.0 MT-TY-201 Mt tRNA gastroesophageal sphincter (Tissue)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 13252.00 46.44 56.43 100.0 MT-TY-201 Mt tRNA gastroesophageal sphincter (Tissue)