ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000722183.1 ENST00000722183.1_143_158_+ 143–158 622.00 8.07 4.14 86.99 ENST00000722183 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000722183.1 ENST00000722183.1_126_158_+ 126–158 193.00 2.50 1.29 100.0 ENST00000722183 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 10.00 58.82 0.07 100.0 MIR34BHG-202 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 14046.00 86.27 93.60 89.32 THBS3-AS1-228 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 3.00 27.27 0.02 100.0 MIR200CHG-202 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 4.00 36.36 0.03 100.0 MIR200CHG-202 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 116.00 4.60 0.77 100.0 SNHG16-266 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 709.00 28.12 4.72 100.0 SNHG16-266 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 56.00 2.22 0.37 100.0 SNHG16-266 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 219.00 8.69 1.46 100.0 SNHG16-266 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 106.00 16.72 0.71 100.0 NR2F2-AS1-327 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 1477.00 5.80 9.84 47.02 ENST00000747675 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 5342.00 20.99 35.60 100.0 ENST00000747675 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 1080.00 4.24 7.20 42.24 ENST00000747675 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 584.00 2.30 3.89 28.34 ENST00000747675 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 10656.00 41.88 71.01 100.0 ENST00000747675 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 8257.00 23.46 55.02 95.96 SNHG26-250 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 20035.00 56.93 133.51 94.77 SNHG26-250 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 768.00 20.38 5.12 100.0 LINC02422-207 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 180.00 5.77 1.20 100.0 ENST00000753088 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 12.00 0.38 0.08 100.0 ENST00000753088 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 606.43 0.53 4.04 53.43 ENST00000756336 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 1992.00 1.73 13.27 100.0 ENST00000756336 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 6679.00 5.79 44.51 100.0 ENST00000756336 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 859.00 0.75 5.72 100.0 ENST00000756336 lncRNA esophagus muscularis mucosa (Tissue)