ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 898.00 18.47 5.98 92.29 MIR126-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 3729.00 76.68 24.85 100.0 MIR126-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 62.00 50.00 0.41 100.0 MIR374A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 7.00 100.00 0.05 100.0 MIR31-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 1481.00 0.47 9.87 90.09 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 6.00 0.00 0.04 54.55 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 68.00 0.02 0.45 52.71 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 23.00 0.01 0.15 100.0 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 160.00 0.05 1.07 32.92 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 53.00 0.02 0.35 100.0 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 377.83 0.12 2.52 36.79 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 1657.00 0.52 11.04 69.56 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 1663.00 0.53 11.08 60.21 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 1210.00 0.38 8.06 72.89 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 8.00 0.00 0.05 100.0 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 79.00 0.02 0.53 77.45 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 640.88 0.20 4.27 57.07 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 943.81 0.30 6.29 69.14 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 1137.00 0.36 7.58 40.52 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 361.00 0.11 2.41 57.39 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 585.91 0.19 3.90 43.63 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 20231.00 6.39 134.82 99.2 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 6860.00 2.17 45.71 80.43 RNA5S12-201 rRNA esophagus muscularis mucosa (Tissue)
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 98.00 12.86 0.65 100.0 Y_RNA.14-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 50.00 11.11 0.33 100.0 SNORD115-34-201 snoRNA esophagus muscularis mucosa (Tissue)