ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 51.00 83.61 0.34 83.61 MIR381-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362154.1 ENST00000362154.1_48_70_+ 48–70 2500.00 74.54 16.66 90.16 MIR103A2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362162.1 ENST00000362162.1_14_35_+ 14–35 45.00 48.39 0.30 100.0 MIR425-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362162.1 ENST00000362162.1_14_38_+ 14–38 19.00 20.43 0.13 100.0 MIR425-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362168.1 ENST00000362168.1_66_87_+ 66–87 63.00 49.22 0.42 100.0 MIR210-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362177.3 ENST00000362177.3_43_64_+ 43–64 38817.00 97.04 258.67 97.82 MIR378A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362181.3 ENST00000362181.3_6_27_+ 6–27 600.00 78.12 4.00 100.0 MIR361-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362195.3 ENST00000362195.3_49_70_+ 49–70 10667.00 93.09 71.08 97.06 MIR101-2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362195.3 ENST00000362195.3_48_66_+ 48–66 201.00 1.75 1.34 38.36 MIR101-2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362199.3 ENST00000362199.3_51_71_+ 51–71 1.00 25.00 0.01 100.0 MIR323A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362205.1 ENST00000362205.1_10_31_+ 10–31 93717.00 98.75 624.51 99.35 MIR26A1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362207.3 ENST00000362207.3_15_35_+ 15–35 5.00 38.46 0.03 100.0 MIR129-2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362212.1 ENST00000362212.1_61_83_+ 61–83 433.00 78.16 2.89 100.0 MIR342-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362215.3 ENST00000362215.3_44_65_+ 44–65 18681.00 90.15 124.49 91.09 MIR148A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362215.3 ENST00000362215.3_6_27_+ 6–27 71.00 0.34 0.47 100.0 MIR148A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362222.4 ENST00000362222.4_50_70_+ 50–70 79.00 100.00 0.53 100.0 MIR410-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362237.3 ENST00000362237.3_47_68_+ 47–68 686.00 87.95 4.57 100.0 MIR409-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362237.3 ENST00000362237.3_15_37_+ 15–37 20.00 2.56 0.13 100.0 MIR409-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362239.4 ENST00000362239.4_16_36_+ 16–36 264.00 99.25 1.76 100.0 MIR411-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362251.4 ENST00000362251.4_12_33_+ 12–33 4794.00 91.26 31.95 93.47 MIR26B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362252.3 ENST00000362252.3_63_86_+ 63–86 320.00 67.65 2.13 75.47 MIR148B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362280.3 ENST00000362280.3_5_26_+ 5–26 11300.00 95.33 75.30 97.87 MIRLET7G-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362283.1 ENST00000362283.1_6_21_+ 6–21 573.00 3.17 3.82 100.0 MIR30D-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 12387.00 68.50 82.54 94.93 MIR30D-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 4241.00 23.45 28.26 86.52 MIR30D-201 miRNA esophagus muscularis mucosa (Tissue)