ENCFF797VVQ

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR233DGJ
Description: Part of ENCODE experiment ENCSR233DGJ. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 21.00 100.00 0.14 100.0 MIR548K-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 305.00 61.87 2.03 100.0 MIR320B2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 50.00 100.00 0.33 100.0 MIR1271-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 1268.00 3.44 8.45 100.0 SNORD100-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 371.00 1.01 2.47 100.0 SNORD100-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000408573.1 ENST00000408573.1_4_71_+ 4–71 31687.00 86.04 211.16 100.0 SNORD100-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 1678.00 4.56 11.18 100.0 SNORD100-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 2148.00 66.90 14.31 100.0 SNORD111B-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 208.00 11.21 1.39 100.0 RNU2-36P-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 118.00 6.36 0.79 100.0 RNU2-36P-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 750.00 3.56 5.00 100.0 SNORD19C-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 19608.00 93.12 130.66 99.24 SNORD19C-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 3.00 0.02 0.02 100.0 SNORD12B-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 11768.00 83.17 78.42 94.39 SNORD12B-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 1157.00 8.18 7.71 100.0 SNORD12B-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 4.00 0.31 0.03 100.0 Y_RNA.609-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 134.00 38.84 0.89 100.0 Y_RNA.612-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 593.00 0.43 3.95 100.0 SNORD71-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 139.00 0.10 0.93 100.0 SNORD71-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 135121.00 98.70 900.42 99.88 SNORD71-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 2658.00 89.40 17.71 95.0 MIR194-2HG-201 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 277.00 9.32 1.85 49.55 MIR194-2HG-201 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 26.00 1.60 0.17 100.0 LINC01783-201 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 16.00 84.21 0.11 100.0 RPS7P15-201 processed pseudogene esophagus muscularis mucosa (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 342.00 13.14 2.28 100.0 SNORD62B-201 snoRNA esophagus muscularis mucosa (Tissue)