ENCFF768XBE

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR539RDF
Description: Part of ENCODE experiment ENCSR539RDF. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 589.00 0.46 4.25 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 33.00 0.03 0.24 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 207.15 0.16 1.49 63.54 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 77.00 0.06 0.56 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 155.53 0.12 1.12 47.56 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 281.00 0.22 2.03 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 672.00 44.50 4.85 100.0 SNORD114-9-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 618.00 40.93 4.46 100.0 SNORD114-9-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 1498.00 17.12 10.80 100.0 Y_RNA.234-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 26.00 0.88 0.19 100.0 RNA5SP141-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 52.00 52.53 0.37 100.0 SNORD114-15-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 66.00 15.24 0.48 100.0 ENST00000364722 snoRNA upper lobe of left lung (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 79.00 58.09 0.57 100.0 SNORD113-3-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 7537.00 76.77 54.35 100.0 SNORD52-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 731.00 68.25 5.27 100.0 SNORD114-3-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 14.00 1.31 0.10 100.0 SNORD114-3-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 214.00 19.98 1.54 100.0 SNORD114-3-201 snoRNA upper lobe of left lung (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 193.00 9.48 1.39 100.0 RNA5SP298-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 236.00 78.15 1.70 100.0 SNORD113-9-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 3075.00 6.08 22.17 100.0 SNORD38A-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 788.00 1.56 5.68 100.0 SNORD38A-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 44142.00 87.32 318.30 100.0 SNORD38A-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 2695.00 86.10 19.43 96.18 SNORD114-20-201 snoRNA upper lobe of left lung (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 4.00 0.44 0.03 22.22 7SK.1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 208.00 23.01 1.50 88.14 7SK.1-201 misc RNA upper lobe of left lung (Tissue)