ENCFF768XBE

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR539RDF
Description: Part of ENCODE experiment ENCSR539RDF. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 2402.00 12.76 17.32 65.31 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 6.00 0.03 0.04 100.0 RNU5A-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 308.00 91.39 2.22 100.0 SNORD114-14-201 snoRNA upper lobe of left lung (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 31.00 0.06 0.22 100.0 SNORD104-201 snoRNA upper lobe of left lung (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 3625.00 6.62 26.14 100.0 SNORD104-201 snoRNA upper lobe of left lung (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 79347.00 66.82 572.16 73.65 RNA5SP358-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 95.00 2.92 0.69 32.99 RNA5SP145-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 4.00 25.00 0.03 100.0 Y_RNA.105-201 misc RNA upper lobe of left lung (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 7.00 1.82 0.05 100.0 RNY4P9-201 misc RNA upper lobe of left lung (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 1538.00 29.57 11.09 100.0 RNU5B-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 833.00 16.02 6.01 100.0 RNU5B-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 41.00 0.79 0.30 100.0 RNU5B-1-201 snRNA upper lobe of left lung (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 5.00 0.42 0.04 62.5 RNY4P27-201 misc RNA upper lobe of left lung (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 81.00 6.80 0.58 96.43 RNY4P27-201 misc RNA upper lobe of left lung (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 590.00 29.86 4.25 100.0 Y_RNA.136-201 misc RNA upper lobe of left lung (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 2554.00 92.97 18.42 98.31 SNORD114-25-201 snoRNA upper lobe of left lung (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 675.00 95.07 4.87 100.0 SNORD113-7-201 snoRNA upper lobe of left lung (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 290.00 38.93 2.09 100.0 Y_RNA.181-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 1299.56 31.38 9.37 74.86 RNY1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 81.00 1.96 0.58 100.0 RNY1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 103.00 2.49 0.74 100.0 RNY1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 376.01 9.08 2.71 33.81 RNY1-201 misc RNA upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 188.00 0.15 1.36 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 3594.00 2.78 25.92 100.0 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 4716.62 3.65 34.01 36.07 RNA5SP202-201 rRNA pseudogene upper lobe of left lung (Tissue)