ENCFF768XBE

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR539RDF
Description: Part of ENCODE experiment ENCSR539RDF. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 738.00 2.10 5.32 100.0 GAS5-377 lncRNA upper lobe of left lung (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 12.00 0.03 0.09 100.0 GAS5-377 lncRNA upper lobe of left lung (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 2618.00 7.44 18.88 100.0 GAS5-377 lncRNA upper lobe of left lung (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 30804.00 87.49 222.12 100.0 GAS5-377 lncRNA upper lobe of left lung (Tissue)
ENST00000830954.1 ENST00000830954.1_968_989_+ 968–989 9.00 60.00 0.06 100.0 MIR205HG-245 lncRNA upper lobe of left lung (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 78.00 1.36 0.56 100.0 ZFAS1-238 lncRNA upper lobe of left lung (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 67.00 1.17 0.48 100.0 ZFAS1-238 lncRNA upper lobe of left lung (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 3160.00 55.19 22.79 100.0 ZFAS1-238 lncRNA upper lobe of left lung (Tissue)
ENST00000836997.1 ENST00000836997.1_305_352_+ 305–352 9475.00 93.59 68.32 100.0 ZFAS1-242 lncRNA upper lobe of left lung (Tissue)
ENST00000837997.1 ENST00000837997.1_214_225_+ 214–225 805.00 29.15 5.80 100.0 ENST00000837997 lncRNA upper lobe of left lung (Tissue)
ENST00000837997.1 ENST00000837997.1_211_224_+ 211–224 750.00 27.15 5.41 100.0 ENST00000837997 lncRNA upper lobe of left lung (Tissue)
ENST00000839036.1 ENST00000839036.1_40_61_+ 40–61 5899.00 78.13 42.54 86.08 ENST00000839036 lncRNA upper lobe of left lung (Tissue)
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 234.00 12.16 1.69 100.0 ENST00000849527 lncRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 41992.00 92.81 302.80 98.07 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 108.00 0.24 0.78 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 234.00 0.05 1.69 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 560.00 25.55 4.04 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 1110.00 50.64 8.00 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 572.00 24.29 4.12 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 1732.00 15.96 12.49 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 895.00 44.84 6.45 92.08 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 185.00 0.04 1.33 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 2715.00 25.69 19.58 84.82 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 501.00 4.74 3.61 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA upper lobe of left lung (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 380.00 3.60 2.74 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA upper lobe of left lung (Tissue)