ENCFF768XBE

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR539RDF
Description: Part of ENCODE experiment ENCSR539RDF. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 22820.00 25.54 164.55 86.29 SNHG25-206 lncRNA upper lobe of left lung (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 535.00 0.60 3.86 100.0 SNHG25-206 lncRNA upper lobe of left lung (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 1516.00 84.69 10.93 88.29 MIR155HG-205 lncRNA upper lobe of left lung (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 352.00 3.06 2.54 100.0 ENST00000785178 lncRNA upper lobe of left lung (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 198.00 7.07 1.43 31.73 ENST00000786284 lncRNA upper lobe of left lung (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 395.00 14.10 2.85 100.0 ENST00000786284 lncRNA upper lobe of left lung (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 426.00 15.20 3.07 71.72 ENST00000786284 lncRNA upper lobe of left lung (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 8739.92 37.73 63.02 59.72 ENST00000797550 lncRNA upper lobe of left lung (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 7174.47 30.97 51.73 49.03 ENST00000797550 lncRNA upper lobe of left lung (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 4248.00 18.34 30.63 74.37 ENST00000797550 lncRNA upper lobe of left lung (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 803158.00 87.36 5791.49 92.87 MIR181A1HG-212 lncRNA upper lobe of left lung (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 1286.00 0.14 9.27 100.0 MIR181A1HG-212 lncRNA upper lobe of left lung (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 133.00 57.83 0.96 100.0 C19orf48P-218 lncRNA upper lobe of left lung (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 5686.00 70.31 41.00 92.92 SNHG18-220 lncRNA upper lobe of left lung (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 143.00 10.31 1.03 100.0 ENST00000817026 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_126_169_+ 126–169 8.00 0.20 0.06 100.0 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 98.20 2.41 0.71 33.86 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 64.09 1.57 0.46 48.55 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 241.29 5.91 1.74 58.0 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 103.15 2.53 0.74 28.03 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 73.00 1.79 0.53 84.88 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 200.69 4.92 1.45 32.58 ENST00000823279 lncRNA upper lobe of left lung (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 539.27 13.20 3.89 73.27 ENST00000823801 lncRNA upper lobe of left lung (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 443.00 61.61 3.19 75.99 ENST00000827714 lncRNA upper lobe of left lung (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 140.00 19.47 1.01 24.01 ENST00000827714 lncRNA upper lobe of left lung (Tissue)