ENCFF744HOK

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR998CRC
Description: Part of ENCODE experiment ENCSR998CRC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 139.00 44.84 0.43 100.0 SNORD14D-201 snoRNA gastroesophageal sphincter (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 15.00 3.24 0.05 100.0 Y_RNA.555-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 2756.00 89.02 8.45 90.45 MIR25-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 57911.00 96.58 177.49 99.48 MIR99B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 6399.00 30.91 19.61 75.46 MIR23B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 13246.00 63.98 40.60 86.38 MIR23B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 14.00 20.90 0.04 100.0 MIR203A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 4828.00 86.65 14.80 93.26 MIR199B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 240.00 4.31 0.74 100.0 MIR199B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 655.00 94.93 2.01 100.0 MIR30B-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 841.00 94.49 2.58 100.0 MIR181D-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 13.00 86.67 0.04 100.0 MIR215-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 365.00 0.86 1.12 100.0 MIR181A2-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 139657.00 99.13 428.04 99.46 MIR191-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 31.00 68.89 0.10 72.09 MIR149-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 449.00 89.26 1.38 99.56 MIR181C-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 39.00 7.75 0.12 100.0 MIR181C-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 17.00 53.12 0.05 100.0 MIR194-1-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 652.00 86.70 2.00 88.47 MIR128-2-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 969.00 76.60 2.97 85.45 MIR99A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 433423.00 92.55 1328.41 95.05 MIR28-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 1360.00 0.29 4.17 89.24 MIR28-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 8623.00 1.84 26.43 100.0 MIR28-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 38.00 41.30 0.12 100.0 MIR183-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 2406.00 12.83 7.37 100.0 MIR145-201 miRNA gastroesophageal sphincter (Tissue)