ENCFF744HOK

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR998CRC
Description: Part of ENCODE experiment ENCSR998CRC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 815.00 49.51 2.50 100.0 ENST00000772672 lncRNA gastroesophageal sphincter (Tissue)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 1.00 0.06 0.00 100.0 ENST00000772672 lncRNA gastroesophageal sphincter (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 9.00 0.55 0.03 100.0 ENST00000772672 lncRNA gastroesophageal sphincter (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 132.00 13.51 0.40 100.0 ENST00000773843 lncRNA gastroesophageal sphincter (Tissue)
ENST00000775062.1 ENST00000775062.1_1327_1402_+ 1327–1402 106.00 0.03 0.32 100.0 SNHG12-223 lncRNA gastroesophageal sphincter (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 205932.00 54.74 631.17 94.33 SNHG12-223 lncRNA gastroesophageal sphincter (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 168311.00 44.74 515.86 98.54 SNHG12-223 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 17847.00 1.32 54.70 100.0 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 1180618.00 87.33 3618.50 90.05 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 705.00 0.05 2.16 100.0 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 351.04 0.03 1.08 51.02 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 572.45 0.04 1.75 62.43 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 574.80 0.04 1.76 41.09 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 11986.00 0.89 36.74 93.25 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 212.00 0.02 0.65 100.0 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 452.00 82.94 1.39 86.26 MIR155HG-205 lncRNA gastroesophageal sphincter (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 7.00 43.75 0.02 100.0 ENST00000784740 lncRNA gastroesophageal sphincter (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 69.00 1.77 0.21 100.0 ENST00000785178 lncRNA gastroesophageal sphincter (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 668.00 2.64 2.05 87.32 ENST00000786284 lncRNA gastroesophageal sphincter (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 7557.00 29.88 23.16 100.0 ENST00000786284 lncRNA gastroesophageal sphincter (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 97.00 0.38 0.30 17.57 ENST00000786284 lncRNA gastroesophageal sphincter (Tissue)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 235.00 6.33 0.72 84.53 ENST00000788343 lncRNA gastroesophageal sphincter (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 4450.64 48.00 13.64 58.72 ENST00000797550 lncRNA gastroesophageal sphincter (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 2585.01 27.88 7.92 34.11 ENST00000797550 lncRNA gastroesophageal sphincter (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 247.00 2.66 0.76 91.48 ENST00000797550 lncRNA gastroesophageal sphincter (Tissue)