ENCFF744HOK

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR998CRC
Description: Part of ENCODE experiment ENCSR998CRC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 40310.00 88.27 123.55 96.85 MIR181A1HG-212 lncRNA gastroesophageal sphincter (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 32.00 0.07 0.10 100.0 MIR181A1HG-212 lncRNA gastroesophageal sphincter (Tissue)
ENST00000812667.1 ENST00000812667.1_308_348_+ 308–348 90.00 52.02 0.28 100.0 C19orf48P-218 lncRNA gastroesophageal sphincter (Tissue)
ENST00000812667.1 ENST00000812667.1_307_393_+ 307–393 37.00 21.39 0.11 100.0 C19orf48P-218 lncRNA gastroesophageal sphincter (Tissue)
ENST00000815283.1 ENST00000815283.1_298_361_+ 298–361 2233.00 65.68 6.84 90.51 SNHG18-220 lncRNA gastroesophageal sphincter (Tissue)
ENST00000817026.1 ENST00000817026.1_659_679_+ 659–679 393.00 18.35 1.20 100.0 ENST00000817026 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 16.00 0.33 0.05 100.0 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_109_169_+ 109–169 29.31 0.61 0.09 56.37 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_103_169_+ 103–169 142.34 2.97 0.44 69.1 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 578.00 12.05 1.77 100.0 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_107_169_+ 107–169 37.48 0.78 0.11 39.04 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_105_169_+ 105–169 81.44 1.70 0.25 32.97 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_131_169_+ 131–169 57.00 1.19 0.17 81.43 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823279.1 ENST00000823279.1_151_169_+ 151–169 15.05 0.31 0.05 11.58 ENST00000823279 lncRNA gastroesophageal sphincter (Tissue)
ENST00000823801.1 ENST00000823801.1_153_169_+ 153–169 135.45 2.82 0.42 74.42 ENST00000823801 lncRNA gastroesophageal sphincter (Tissue)
ENST00000827714.1 ENST00000827714.1_110_129_+ 110–129 1882.00 68.51 5.77 88.07 ENST00000827714 lncRNA gastroesophageal sphincter (Tissue)
ENST00000827714.1 ENST00000827714.1_110_131_+ 110–131 255.00 9.28 0.78 11.93 ENST00000827714 lncRNA gastroesophageal sphincter (Tissue)
ENST00000828033.1 ENST00000828033.1_252_322_+ 252–322 1042.00 3.99 3.19 100.0 GAS5-377 lncRNA gastroesophageal sphincter (Tissue)
ENST00000828033.1 ENST00000828033.1_278_318_+ 278–318 6.00 0.02 0.02 100.0 GAS5-377 lncRNA gastroesophageal sphincter (Tissue)
ENST00000828033.1 ENST00000828033.1_290_318_+ 290–318 1014.00 3.88 3.11 100.0 GAS5-377 lncRNA gastroesophageal sphincter (Tissue)
ENST00000828033.1 ENST00000828033.1_252_318_+ 252–318 22894.00 87.64 70.17 100.0 GAS5-377 lncRNA gastroesophageal sphincter (Tissue)
ENST00000836993.1 ENST00000836993.1_387_463_+ 387–463 145107.00 97.35 444.74 99.41 ZFAS1-238 lncRNA gastroesophageal sphincter (Tissue)
ENST00000836993.1 ENST00000836993.1_422_463_+ 422–463 10.00 0.01 0.03 100.0 ZFAS1-238 lncRNA gastroesophageal sphincter (Tissue)
ENST00000836993.1 ENST00000836993.1_402_463_+ 402–463 45.00 0.03 0.14 100.0 ZFAS1-238 lncRNA gastroesophageal sphincter (Tissue)
ENST00000836993.1 ENST00000836993.1_410_463_+ 410–463 942.00 0.63 2.89 100.0 ZFAS1-238 lncRNA gastroesophageal sphincter (Tissue)