ENCFF744HOK

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR998CRC
Description: Part of ENCODE experiment ENCSR998CRC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 24117.00 28.88 73.92 100.0 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 3355.00 4.02 10.28 100.0 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 1629.00 1.95 4.99 100.0 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 792.02 0.95 2.43 34.47 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 1729.00 2.07 5.30 65.77 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 4860.28 5.82 14.90 31.47 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 1331.48 1.59 4.08 58.55 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 5822.00 6.97 17.84 100.0 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 13328.74 15.96 40.85 71.99 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 4.00 0.33 0.01 100.0 ENST00000756452 lncRNA gastroesophageal sphincter (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 1613.00 16.80 4.94 100.0 ENST00000760093 lncRNA gastroesophageal sphincter (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 195.00 2.03 0.60 100.0 ENST00000760093 lncRNA gastroesophageal sphincter (Tissue)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 87337.00 85.75 267.68 90.26 SNHG14-356 lncRNA gastroesophageal sphincter (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 3308.00 16.75 10.14 81.96 LINC02806-241 lncRNA gastroesophageal sphincter (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 66.00 0.33 0.20 100.0 LINC02806-241 lncRNA gastroesophageal sphincter (Tissue)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 3.00 0.02 0.01 100.0 LINC02806-241 lncRNA gastroesophageal sphincter (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 7004.00 35.46 21.47 77.57 LINC02806-241 lncRNA gastroesophageal sphincter (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 5972.00 97.71 18.30 100.0 EHBP1-AS1-210 lncRNA gastroesophageal sphincter (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 1104.00 12.12 3.38 100.0 ENST00000770398 lncRNA gastroesophageal sphincter (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 6148.00 67.49 18.84 100.0 ENST00000770398 lncRNA gastroesophageal sphincter (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 235.00 2.58 0.72 100.0 ENST00000770398 lncRNA gastroesophageal sphincter (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 1228.00 8.37 3.76 100.0 ENST00000771298 lncRNA gastroesophageal sphincter (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 18.00 0.12 0.06 100.0 ENST00000771298 lncRNA gastroesophageal sphincter (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 8003.00 54.52 24.53 97.73 ENST00000771298 lncRNA gastroesophageal sphincter (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 340.00 2.32 1.04 100.0 ENST00000771298 lncRNA gastroesophageal sphincter (Tissue)