ENCFF744HOK

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR998CRC
Description: Part of ENCODE experiment ENCSR998CRC. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 350.00 0.10 1.07 64.22 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 371.00 0.10 1.14 100.0 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 1763.00 0.49 5.40 57.04 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 36534.00 10.09 111.97 63.03 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 5721.00 1.58 17.53 82.96 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 9806.00 2.71 30.05 100.0 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 150.00 0.04 0.46 100.0 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 1357.00 0.37 4.16 100.0 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 76744.00 21.19 235.21 98.49 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 163407.00 45.11 500.83 99.52 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 160.00 0.04 0.49 100.0 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 538.00 0.15 1.65 100.0 RNY4-201 misc RNA gastroesophageal sphincter (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 1131.00 72.73 3.47 77.47 MIR3142HG-201 lncRNA gastroesophageal sphincter (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 7045.00 90.41 21.59 100.0 SNHG6-204 retained intron gastroesophageal sphincter (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 3800.00 13.47 11.65 100.0 MIR151A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 21877.00 77.53 67.05 91.45 MIR151A-201 miRNA gastroesophageal sphincter (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 1251.00 99.36 3.83 100.0 DENND3-221 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 264.00 1.95 0.81 100.0 WDR74-204 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 127.00 0.94 0.39 100.0 WDR74-204 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 768.00 5.68 2.35 100.0 WDR74-204 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 676.00 5.00 2.07 70.71 WDR74-204 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 202.00 1.49 0.62 100.0 WDR74-204 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 162.00 1.20 0.50 51.1 WDR74-204 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 625.00 4.62 1.92 70.94 WDR74-204 protein coding gastroesophageal sphincter (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 155.00 1.15 0.48 48.9 WDR74-204 protein coding gastroesophageal sphincter (Tissue)