ENCFF728EUS

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR968DMR
Description: Part of ENCODE experiment ENCSR968DMR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 3563.00 5.42 22.92 100.0 MIR30A-201 miRNA sigmoid colon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 415.00 0.63 2.67 100.0 MIR30A-201 miRNA sigmoid colon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 13517.00 20.56 86.96 89.11 MIR30A-201 miRNA sigmoid colon (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 1493.00 0.77 9.60 100.0 MIR27B-201 miRNA sigmoid colon (Tissue)
ENST00000385129.3 ENST00000385129.3_61_80_+ 61–80 178913.00 92.17 1150.98 94.73 MIR27B-201 miRNA sigmoid colon (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 23.00 79.31 0.15 100.0 MIR196A2-201 miRNA sigmoid colon (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 24.00 44.44 0.15 75.0 MIR654-201 miRNA sigmoid colon (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 243.00 98.38 1.56 100.0 MIR204-201 miRNA sigmoid colon (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 2433.00 94.56 15.65 100.0 MIR152-201 miRNA sigmoid colon (Tissue)
ENST00000385219.1 ENST00000385219.1_23_45_+ 23–45 17.00 58.62 0.11 100.0 MIR138-1-201 miRNA sigmoid colon (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 1713.00 81.84 11.02 100.0 MIR30C1-201 miRNA sigmoid colon (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 46.00 85.19 0.30 100.0 MIR660-201 miRNA sigmoid colon (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 693.00 8.37 4.46 100.0 MIR125B1-201 miRNA sigmoid colon (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 5713.00 68.99 36.75 83.84 MIR125B1-201 miRNA sigmoid colon (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 5.00 100.00 0.03 100.0 MIR493-201 miRNA sigmoid colon (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 308.58 54.04 1.99 64.15 MIR182-201 miRNA sigmoid colon (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 162.50 28.46 1.05 32.31 MIR182-201 miRNA sigmoid colon (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 10569.00 88.33 67.99 90.53 MIR100-201 miRNA sigmoid colon (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 403.00 97.58 2.59 100.0 MIR301A-201 miRNA sigmoid colon (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 6515.00 90.59 41.91 96.38 MIR130A-201 miRNA sigmoid colon (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 633.00 8.80 4.07 51.97 MIR130A-201 miRNA sigmoid colon (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 117887.00 97.86 758.39 98.86 MIRLET7F2-201 miRNA sigmoid colon (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 155.00 88.57 1.00 100.0 MIR652-201 miRNA sigmoid colon (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 2441.00 80.43 15.70 100.0 MIR140-201 miRNA sigmoid colon (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 132.00 34.46 0.85 73.33 MIR106B-201 miRNA sigmoid colon (Tissue)