ENCFF728EUS

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR968DMR
Description: Part of ENCODE experiment ENCSR968DMR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 132.00 34.46 0.85 73.33 MIR106B-201 miRNA sigmoid colon (Tissue)
ENST00000386967.1 ENST00000386967.1_2_70_+ 2–70 475.00 68.64 3.06 100.0 SNORD41-201 snoRNA sigmoid colon (Tissue)
ENST00000387314.1 ENST00000387314.1_41_56_+ 41–56 355.00 14.66 2.28 50.79 MT-TF-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387314.1 ENST00000387314.1_1_54_+ 1–54 79.00 3.26 0.51 100.0 MT-TF-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387314.1 ENST00000387314.1_35_54_+ 35–54 325.00 13.42 2.09 61.32 MT-TF-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387342.1 ENST00000387342.1_1_53_+ 1–53 548.00 22.27 3.53 100.0 MT-TV-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1559_+ 1500–1559 30.00 0.58 0.19 100.0 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1297_1329_+ 1297–1329 59.00 1.14 0.38 100.0 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1531_+ 1500–1531 494.00 9.54 3.18 83.87 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_74_96_+ 74–96 5.00 0.10 0.03 100.0 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1132_1147_+ 1132–1147 153.00 2.95 0.98 100.0 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1357_1376_+ 1357–1376 54.00 1.04 0.35 100.0 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387347.2 ENST00000387347.2_1500_1528_+ 1500–1528 370.00 7.14 2.38 78.22 MT-RNR2-201 Mt rRNA sigmoid colon (Tissue)
ENST00000387365.1 ENST00000387365.1_1_58_+ 1–58 129.00 15.11 0.83 100.0 MT-TI-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387365.1 ENST00000387365.1_1_51_+ 1–51 315.00 36.89 2.03 94.88 MT-TI-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387372.1 ENST00000387372.1_1_30_+ 1–30 4362.78 13.39 28.07 65.53 MT-TQ-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387372.1 ENST00000387372.1_1_32_+ 1–32 5242.62 16.09 33.73 50.01 MT-TQ-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387372.1 ENST00000387372.1_1_55_+ 1–55 81.00 0.25 0.52 100.0 MT-TQ-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387372.1 ENST00000387372.1_1_36_+ 1–36 13747.00 42.19 88.44 87.66 MT-TQ-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387377.1 ENST00000387377.1_1_51_+ 1–51 879.00 20.49 5.65 100.0 MT-TM-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387377.1 ENST00000387377.1_1_31_+ 1–31 1294.00 30.17 8.32 60.55 MT-TM-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387405.1 ENST00000387405.1_1_24_+ 1–24 395.00 30.74 2.54 100.0 MT-TC-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_37_+ 1–37 9451.00 23.24 60.80 88.65 MT-TY-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_50_+ 1–50 57.00 0.14 0.37 100.0 MT-TY-201 Mt tRNA sigmoid colon (Tissue)
ENST00000387409.1 ENST00000387409.1_1_65_+ 1–65 13529.00 33.26 87.03 100.0 MT-TY-201 Mt tRNA sigmoid colon (Tissue)