ENCFF728EUS

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR968DMR
Description: Part of ENCODE experiment ENCSR968DMR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 1479.00 78.67 9.51 85.1 MIR99A-201 miRNA sigmoid colon (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 2349.00 0.66 15.11 85.57 MIR28-201 miRNA sigmoid colon (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 3369.00 0.95 21.67 100.0 MIR28-201 miRNA sigmoid colon (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 319604.00 90.31 2056.08 93.15 MIR28-201 miRNA sigmoid colon (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 10793.00 65.67 69.43 100.0 MIR145-201 miRNA sigmoid colon (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 2584.00 15.72 16.62 100.0 MIR145-201 miRNA sigmoid colon (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 9315.00 98.37 59.93 99.43 MIR186-201 miRNA sigmoid colon (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 17.00 80.95 0.11 100.0 MIR200B-201 miRNA sigmoid colon (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 99.00 26.83 0.64 100.0 MIR218-1-201 miRNA sigmoid colon (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 5035.00 91.51 32.39 95.23 MIR181B2-201 miRNA sigmoid colon (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 1303004.00 87.88 8382.49 88.43 MIR10B-201 miRNA sigmoid colon (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 10.00 7.69 0.06 100.0 MIR130B-201 miRNA sigmoid colon (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 34.89 26.84 0.22 63.44 MIR130B-201 miRNA sigmoid colon (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 67.74 52.11 0.44 62.73 MIR130B-201 miRNA sigmoid colon (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 1685.00 14.92 10.84 100.0 MIR199A1-201 miRNA sigmoid colon (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 16.00 88.89 0.10 100.0 MIR487B-201 miRNA sigmoid colon (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 367.55 40.98 2.36 45.89 MIR93-201 miRNA sigmoid colon (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 485.40 54.11 3.12 56.38 MIR93-201 miRNA sigmoid colon (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 414.00 81.50 2.66 91.39 MIR532-201 miRNA sigmoid colon (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 43.00 91.49 0.28 100.0 MIR15B-201 miRNA sigmoid colon (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 345.00 87.34 2.22 100.0 MIR150-201 miRNA sigmoid colon (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 22.00 84.62 0.14 100.0 MIR542-201 miRNA sigmoid colon (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 14.00 5.91 0.09 100.0 MIR500A-201 miRNA sigmoid colon (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 169.00 71.31 1.09 100.0 MIR500A-201 miRNA sigmoid colon (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 13517.00 20.56 86.96 89.11 MIR30A-201 miRNA sigmoid colon (Tissue)