ENCFF728EUS

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR968DMR
Description: Part of ENCODE experiment ENCSR968DMR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 1927.00 26.95 12.40 42.97 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 167.00 2.06 1.07 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 6688.00 1.63 43.03 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 252742.00 61.54 1625.94 94.34 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 139.00 16.26 0.89 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 10.00 0.45 0.06 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 178.00 0.34 1.15 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 402.00 3.07 2.59 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 98.00 0.75 0.63 9.34 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 52.00 0.40 0.33 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 402.00 3.07 2.59 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 2483.00 18.95 15.97 97.41 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 144.00 1.10 0.93 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 3420.00 24.40 22.00 48.12 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 3136.00 22.37 20.17 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 1094.00 9.53 7.04 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 5114.00 49.14 32.90 90.31 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 270.00 2.59 1.74 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 356.00 3.42 2.29 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 73.00 0.70 0.47 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 481.00 4.62 3.09 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 926.00 8.29 5.96 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 2057.00 22.69 13.23 88.47 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 190.00 1.91 1.22 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 130.00 5.40 0.84 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA sigmoid colon (Tissue)