ENCFF728EUS

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR968DMR
Description: Part of ENCODE experiment ENCSR968DMR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 51.00 2.12 0.33 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 395.00 16.40 2.54 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 70.00 2.91 0.45 38.67 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 1849.00 0.32 11.89 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 900.00 34.83 5.79 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 2.00 0.68 0.01 50.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 2.00 0.68 0.01 50.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 347.00 3.69 2.23 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 50.00 0.53 0.32 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 6550.00 94.56 42.14 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 580.00 65.32 3.73 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 332.00 33.43 2.14 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 355.00 0.68 2.28 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 1882.00 3.61 12.11 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 94.00 0.18 0.60 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 345.00 0.66 2.22 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 354.00 0.68 2.28 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 113.00 0.22 0.73 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 336.00 0.06 2.16 63.52 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 424.00 0.07 2.73 54.64 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 24490.00 4.25 157.55 95.08 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 548.00 21.25 3.53 68.93 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 2523.00 94.00 16.23 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 46.00 4.85 0.30 76.67 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 71.00 91.03 0.46 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA sigmoid colon (Tissue)