ENCFF728EUS

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR968DMR
Description: Part of ENCODE experiment ENCSR968DMR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 792.00 14.02 5.10 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 154.00 22.38 0.99 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 90.00 1.04 0.58 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 681.00 35.07 4.38 62.76 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 1074.00 0.18 6.91 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 13.00 16.05 0.08 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 347.00 13.45 2.23 89.43 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 4.00 0.16 0.03 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 275.00 10.66 1.77 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 9621.00 72.96 61.89 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 381.00 0.09 2.45 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 4922.00 1.20 31.66 88.16 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 273.00 0.07 1.76 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 434.00 0.11 2.79 90.04 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 84177.00 20.48 541.53 49.47 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 49.00 0.01 0.32 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 302.00 68.33 1.94 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 164.00 0.03 1.06 100.0 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 865.00 31.28 5.56 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 292.00 10.56 1.88 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 224.00 8.72 1.44 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 36.00 0.32 0.23 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 33.00 0.01 0.21 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 28.00 0.01 0.18 4.48 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA sigmoid colon (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 2558.00 35.78 16.46 69.02 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA sigmoid colon (Tissue)