ENCFF728EUS

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR968DMR
Description: Part of ENCODE experiment ENCSR968DMR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 20077.00 74.76 129.16 100.0 LINC01962-202 lncRNA sigmoid colon (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 704.00 2.62 4.53 81.58 LINC01962-202 lncRNA sigmoid colon (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 1855.00 6.91 11.93 100.0 LINC01962-202 lncRNA sigmoid colon (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 6577.00 93.68 42.31 100.0 MEG8-228 lncRNA sigmoid colon (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 790.00 6.95 5.08 100.0 LIMD1-AS1-204 lncRNA sigmoid colon (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 2525.00 22.20 16.24 89.41 LIMD1-AS1-204 lncRNA sigmoid colon (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 5758.00 59.16 37.04 83.95 MIR99AHG-262 lncRNA sigmoid colon (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 1957.00 20.11 12.59 100.0 MIR99AHG-262 lncRNA sigmoid colon (Tissue)
ENST00000661688.1 ENST00000661688.1_965_986_+ 965–986 4.00 0.67 0.03 100.0 MIR9-2HG-225 lncRNA sigmoid colon (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 501.00 83.36 3.22 96.91 MIR9-2HG-225 lncRNA sigmoid colon (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 170.00 16.11 1.09 100.0 MEG8-233 lncRNA sigmoid colon (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 496.00 47.01 3.19 100.0 MEG8-233 lncRNA sigmoid colon (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 85.00 5.61 0.55 100.0 MEG8-234 lncRNA sigmoid colon (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 763.00 50.33 4.91 100.0 MEG8-234 lncRNA sigmoid colon (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 102.00 32.80 0.66 100.0 MEG8-240 lncRNA sigmoid colon (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 10.00 13.70 0.06 100.0 SNHG14-306 lncRNA sigmoid colon (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 148.00 8.37 0.95 100.0 ENST00000666735 lncRNA sigmoid colon (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 25.00 1.41 0.16 100.0 ENST00000666735 lncRNA sigmoid colon (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 1021.00 77.94 6.57 100.0 MEG8-242 lncRNA sigmoid colon (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 215.00 0.35 1.38 100.0 MEG8-244 lncRNA sigmoid colon (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 122.00 0.20 0.78 100.0 MEG8-244 lncRNA sigmoid colon (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 60935.00 98.13 392.01 99.55 MEG8-244 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 9875.00 2.41 63.53 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 1076.00 0.26 6.92 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 4368.00 1.07 28.10 97.78 SNHG1-248 lncRNA sigmoid colon (Tissue)